Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 NANOGP5-201ENST00000424456 877 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 RPL18P10-201ENST00000425606 538 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 MTND2P5-201ENST00000432656 1006 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 MTND1P33-201ENST00000446251 917 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC008280.2-201ENST00000455473 307 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 RPL23AP14-201ENST00000468281 468 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC007537.2-201ENST00000472093 511 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC006463.2-201ENST00000473326 348 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 MTCO3P35-201ENST00000485582 781 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 RPS4XP15-201ENST00000489210 795 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC112673.1-201ENST00000513168 575 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC008011.1-201ENST00000545989 227 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC139769.3-201ENST00000618383 175 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC006386.1-201ENST00000619436 415 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AL732618.1-201ENST00000623251 301 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 MIR7641-1-201ENST00000627518 61 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC100871.1-201ENST00000507871 1456 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC096656.1-201ENST00000623826 1364 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RNA5SP42-201ENST00000364278 115 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RPL21P65-201ENST00000406094 466 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RNU6-55P-201ENST00000411092 107 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RNU6-954P-201ENST00000411355 107 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 OR8G2P-201ENST00000412796 908 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 LIPT1P1-201ENST00000415870 1186 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC093422.3-201ENST00000428506 305 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ELOCP11-201ENST00000436690 332 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 H2AFZP6-201ENST00000444403 394 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ELOCP16-201ENST00000444494 332 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL031313.1-201ENST00000448435 256 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RPL23AP12-201ENST00000467573 473 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 FCF1P3-201ENST00000496394 590 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 MRPL49P2-201ENST00000521066 465 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 OR8I1P-201ENST00000529291 931 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AP003717.3-201ENST00000544832 1180 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL049870.4-201ENST00000555741 486 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC090525.3-201ENST00000605601 189 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 OR2BH1P-201ENST00000608850 864 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 MIR6500-201ENST00000622700 86 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC007342.8-201ENST00000623278 678 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
UPF2Q9HAU5 CCT8P1-201ENST00000413611 1657 ntBASIC4.45□□□□□ -1.7
UPF2Q9HAU5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 MCTS2P-201ENST00000394552 546 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 AC092638.1-201ENST00000411966 1275 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 HMGB3P31-201ENST00000413333 595 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 AL807761.1-201ENST00000417622 171 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 AL449283.1-202ENST00000418249 604 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 MTCO3P4-201ENST00000419236 787 ntBASIC4.44□□□□□ -1.7
UPF2Q9HAU5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.44□□□□□ -1.7
UPF2Q9HAU5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms