Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC105417.1-201ENST00000514691 285 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 RNU4-49P-201ENST00000516080 140 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 RNU6-1314P-201ENST00000517139 104 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC022616.6-201ENST00000520479 119 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC018630.1-201ENST00000541376 925 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC126615.2-201ENST00000553003 515 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 DNAJC8P1-201ENST00000554535 372 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 SCOCP1-201ENST00000554676 349 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC110588.1-201ENST00000559699 137 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC006270.2-201ENST00000578523 652 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AL513327.3-201ENST00000602618 469 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 DPPA3P3-201ENST00000603842 430 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AP001330.4-201ENST00000604350 154 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC080078.3-201ENST00000605407 463 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 NANOGP3-201ENST00000605855 286 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AL627309.6-201ENST00000606857 840 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AL442067.1-201ENST00000613261 223 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC241377.1-201ENST00000619797 406 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC015908.5-201ENST00000623289 343 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 CU639417.4-201ENST00000623928 207 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 MFSD8-239ENST00000641590 2479 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC109446.4-201ENST00000623235 2755 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 AC119744.1-201ENST00000454746 1715 ntBASIC4.72□□□□□ -1.65
SSBP3Q9BWW4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SSBP3Q9BWW4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SSBP3Q9BWW4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.65
SSBP3Q9BWW4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.65
SSBP3Q9BWW4 LINC02019-201ENST00000608605 2060 ntBASIC4.71□□□□□ -1.65
SSBP3Q9BWW4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RNF6P1-201ENST00000444889 1784 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RPL7P26-201ENST00000333817 754 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 SNORA51.1-201ENST00000363243 140 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP131-201ENST00000365452 119 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP30-201ENST00000365552 115 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 SNORA20.2-201ENST00000383922 131 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 MT-TR-201ENST00000387439 65 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 U3.25-201ENST00000391209 220 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RPL7P25-201ENST00000404151 721 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC245054.2-201ENST00000415639 319 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC079355.1-201ENST00000421770 223 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 SRIP2-201ENST00000428470 166 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 GAPDHP48-201ENST00000436626 961 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL672138.1-201ENST00000450604 1015 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RNU6-329P-201ENST00000459618 107 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 DUTP1-201ENST00000493631 470 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC108693.1-201ENST00000496068 432 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RNA5SP362-201ENST00000516048 118 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 NRBF2P4-201ENST00000520874 850 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC136777.2-201ENST00000522979 358 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 PSMA2P1-201ENST00000526365 646 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 MIR3167-201ENST00000579623 85 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL355598.1-201ENST00000604169 202 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 Z84480.1-201ENST00000605131 311 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL080274.1-201ENST00000605565 220 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms