Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 SNORA69-201ENST00000383895 132 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 MIR1302-11-201ENST00000408051 138 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 MIR1302-9-201ENST00000408365 138 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 MIR1302-10-201ENST00000408734 138 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC211486.3-201ENST00000412694 621 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 PDCL2P1-201ENST00000419302 352 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AF228730.4-201ENST00000421457 183 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC096632.1-201ENST00000427395 310 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AL450023.1-201ENST00000450868 751 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 TRBV26-201ENST00000456572 344 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 MIR1273E-201ENST00000581165 102 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AL353997.4-201ENST00000586196 166 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 VN1R80P-201ENST00000597126 338 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 MIR1302-2-201ENST00000607096 138 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AL050343.2-201ENST00000607338 280 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AL132765.2-201ENST00000610812 351 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 DISC2.1-201ENST00000612827 205 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 RNA5SP439-201ENST00000617595 124 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AC091953.2-201ENST00000623979 160 ntBASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCHD1Q96NR3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RNU4-1-201ENST00000363925 141 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RNU6-692P-201ENST00000384496 107 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 MIR551A-201ENST00000385042 96 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 MIR92A2-201ENST00000385299 75 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC005042.1-201ENST00000393397 800 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AL356432.1-201ENST00000405809 419 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RNU6-373P-201ENST00000411247 98 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 SNRPFP1-201ENST00000414761 252 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AL121776.1-201ENST00000429337 372 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 CEACAMP9-201ENST00000442990 513 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TCEA1P1-201ENST00000449716 880 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RNU6-261P-201ENST00000459506 102 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC021660.1-201ENST00000465006 554 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC011411.1-201ENST00000509592 876 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC243972.3-201ENST00000539655 198 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC037471.2-201ENST00000564941 598 ntBASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCHD1Q96NR3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms