Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL732292.1-201ENST00000426692 226 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AL359265.2-201ENST00000434367 631 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 MTND2P20-201ENST00000440805 661 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RPL23AP93-201ENST00000440847 484 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 MTCO3P2-201ENST00000457365 171 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RPL36AP41-201ENST00000493820 306 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC104685.1-201ENST00000502445 371 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC090151.1-201ENST00000520784 730 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC087373.1-201ENST00000524920 491 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC125611.1-201ENST00000549563 229 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC084757.1-201ENST00000559987 490 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RN7SL690P-201ENST00000582087 240 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC107982.3-201ENST00000584957 985 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 AC004987.4-201ENST00000603383 338 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHMP4CQ96CF2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC087359.1-201ENST00000508335 1740 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RNU1-20P-201ENST00000363314 162 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RNA5SP447-201ENST00000363749 119 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RNU6-657P-201ENST00000383904 107 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 UBTFL3-201ENST00000418934 1024 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AL606662.1-201ENST00000445763 553 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RPL23AP35-201ENST00000451906 501 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 VN1R32P-201ENST00000452234 905 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 UBTFL6-201ENST00000477929 1024 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RN7SL817P-201ENST00000480777 288 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC026979.1-201ENST00000492525 396 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC005726.1-201ENST00000494679 427 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 RNA5SP446-201ENST00000515955 82 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 OR4A12P-201ENST00000530847 918 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 PDCD5P1-201ENST00000543528 309 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC124068.1-201ENST00000563131 678 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AL133338.2-201ENST00000604292 736 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AL163642.2-201ENST00000604722 1019 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC068722.2-201ENST00000618734 544 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC091905.2-201ENST00000623143 306 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC004943.3-201ENST00000624116 600 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 AC117529.2-201ENST00000512159 2068 ntBASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHMP4CQ96CF2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AC025031.4-201ENST00000621248 3271 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL391994.1-201ENST00000254724 282 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 OR4K15-201ENST00000305051 1216 ntBASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHMP4CQ96CF2 AL023807.1-201ENST00000407932 359 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms