Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 SPATA2P1-201ENST00000431223 2055 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 SNORA27.3-201ENST00000364937 134 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 SNORD116-2-201ENST00000384274 95 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 RNU6-1257P-201ENST00000384625 110 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 SNORD116-6-201ENST00000384711 96 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 CCNB2P1-201ENST00000399411 1150 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AL512430.2-201ENST00000406786 339 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 RN7SKP53-201ENST00000411337 315 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 AL035458.1-201ENST00000433096 585 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC091862.1-201ENST00000438016 1100 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 CASP3P1-201ENST00000446037 609 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 HMGB3P22-202ENST00000451823 572 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AL354710.1-201ENST00000453641 246 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 RPL5P30-201ENST00000465511 891 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 UBA52P3-201ENST00000491303 382 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 RNU6-1102P-201ENST00000516149 96 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 SEC11B-201ENST00000518383 499 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC090136.1-201ENST00000520009 240 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC008751.2-201ENST00000597885 980 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 MRPS35P3-201ENST00000603189 709 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AL355493.4-201ENST00000618530 292 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC092159.4-201ENST00000624944 550 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AC126544.2-201ENST00000625174 749 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.36□□□□□ -1.71
SNED1Q8TER0 OR5AC4P-202ENST00000642086 985 ntBASIC4.36□□□□□ -1.71
SNED1Q8TER0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNED1Q8TER0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC087565.3-202ENST00000642085 1603 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNED1Q8TER0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNED1Q8TER0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 RNU6-152P-201ENST00000384037 107 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 UBA52P6-201ENST00000399822 382 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 RPL7P44-201ENST00000424827 742 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL512637.2-201ENST00000431287 1256 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC021205.1-201ENST00000468797 348 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 UBE2DNL-203ENST00000474922 222 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 RPL7P23-201ENST00000493874 747 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 RN7SL504P-201ENST00000494496 287 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 HMGB3P13-201ENST00000511263 607 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 UBTFL10-201ENST00000528532 562 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 NPM1P35-201ENST00000533043 868 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC107918.3-201ENST00000533272 382 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC005951.1-201ENST00000576706 485 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 MIR4509-3-201ENST00000578671 94 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 MIR4509-2-201ENST00000583920 94 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL033523.1-201ENST00000605153 153 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC084036.1-201ENST00000609190 508 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC135507.2-201ENST00000612443 309 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL354976.1-201ENST00000613843 387 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 MIR4509-1-201ENST00000618224 94 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC084824.4-201ENST00000620106 731 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC007275.1-201ENST00000621243 671 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AC097460.3-201ENST00000623099 442 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 AL590396.4-201ENST00000636779 956 ntBASIC4.35□□□□□ -1.71
SNED1Q8TER0 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.35□□□□□ -1.71
SNED1Q8TER0 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 AL451142.2-201ENST00000429076 2090 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNED1Q8TER0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SNED1Q8TER0 RNU6-225P-201ENST00000384613 103 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 MT-TP-201ENST00000387461 68 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 HLFP1-201ENST00000402375 499 ntBASIC4.34□□□□□ -1.71
SNED1Q8TER0 VN1R51P-201ENST00000411675 945 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms