Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RPS15AP12-201ENST00000419498 388 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC006548.1-201ENST00000427470 102 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC093156.1-201ENST00000440382 670 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC093019.1-201ENST00000443135 252 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 HMGB3P21-201ENST00000452483 547 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RN7SL808P-201ENST00000496066 299 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL139099.1-201ENST00000497398 403 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC005798.1-201ENST00000513715 387 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 IGLV3-24-201ENST00000517477 197 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 MTND1P35-201ENST00000526739 508 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC022832.1-201ENST00000530718 645 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL359212.1-201ENST00000556608 614 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 MIR3118-1-201ENST00000581787 76 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC024940.4-201ENST00000605507 246 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL008729.2-201ENST00000606393 473 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC126915.2-201ENST00000610957 190 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL020991.1-201ENST00000612314 373 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 CR381572.1-201ENST00000625098 102 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 SNX18P3-202ENST00000565670 1750 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC109446.4-201ENST00000623235 2755 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC004158.1-201ENST00000564508 4319 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC138915.3-201ENST00000562908 1389 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC093849.1-201ENST00000563631 2209 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.89-201ENST00000363031 102 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 U8.4-201ENST00000363626 134 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.356-201ENST00000365475 113 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.409-201ENST00000383990 98 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MIR765-201ENST00000390226 114 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL133270.1-201ENST00000402635 279 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL121835.1-201ENST00000404250 354 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RN7SKP125-201ENST00000410481 302 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 HMGB3P12-201ENST00000438745 556 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MTND4P19-201ENST00000446659 478 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 TPT1P13-201ENST00000449760 499 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC104308.1-201ENST00000454621 333 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RPL38P1-201ENST00000460914 211 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 ST13P14-201ENST00000474095 734 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RPL7AP6-201ENST00000477943 801 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 TRBV5-2-201ENST00000489095 273 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 LRRC34P2-201ENST00000514850 553 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL163952.1-202ENST00000569625 600 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MIR3146-201ENST00000580367 79 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RPL12P25-202ENST00000598100 674 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 NANOGP3-201ENST00000605855 286 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC008966.2-201ENST00000606157 453 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AL355472.4-201ENST00000610233 626 ntBASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms