Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 RACGAP1P-201ENST00000550663 1879 ntBASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 CTAGE11P-201ENST00000451540 2353 ntBASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRPF38BQ5VTL8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC007938.2-201ENST00000604666 2634 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 SNORD115-7-201ENST00000365306 82 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RNU6-890P-201ENST00000384121 107 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 Y_RNA.574-201ENST00000384766 95 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RPL6P29-201ENST00000414863 865 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RPL35AP31-201ENST00000418340 337 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 PDSS1P1-201ENST00000422953 1114 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AL031736.2-201ENST00000426573 787 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC092162.1-201ENST00000432828 434 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC019185.1-201ENST00000442718 389 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 GEMIN2P1-201ENST00000454246 752 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RPL23AP64-201ENST00000469465 435 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC128713.1-201ENST00000471495 306 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC097473.1-201ENST00000508142 408 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC104806.1-201ENST00000508720 308 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC135001.1-201ENST00000544546 283 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RN7SL52P-201ENST00000584271 284 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC005332.4-201ENST00000592752 579 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 FAM25E-202ENST00000608562 189 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 DUSP12P1-201ENST00000612874 516 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RN7SL722P-201ENST00000617780 284 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RN7SL565P-201ENST00000618246 284 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 PLCE1P1-201ENST00000622094 305 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AL357559.1-201ENST00000622228 274 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AC092608.2-201ENST00000624427 218 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 AL136313.1-201ENST00000624804 202 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 IQCB2P-201ENST00000401788 1633 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRPF38BQ5VTL8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PRPF38BQ5VTL8 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 RNA5SP391-201ENST00000363456 119 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 AL360182.1-201ENST00000397433 468 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 AL391417.1-201ENST00000404100 426 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 RNU2-36P-201ENST00000410361 191 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 RNU4-25P-201ENST00000410569 230 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 OR6E1P-201ENST00000414424 923 ntBASIC6.77□□□□□ -1.33
PRPF38BQ5VTL8 AL139095.3-201ENST00000419672 1203 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms