Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CDK3Q00526 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.06□□□□□ -1.76
CDK3Q00526 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
CDK3Q00526 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
CDK3Q00526 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 RNA5SP283-201ENST00000365604 119 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 RNU6-441P-201ENST00000384545 106 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AL121834.1-202ENST00000404494 277 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 RPL23AP47-201ENST00000408017 460 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 RNU6-628P-201ENST00000410675 107 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 RNA5SP146-201ENST00000410743 123 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 HSPE1P12-201ENST00000412576 301 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 AC008065.1-201ENST00000428525 348 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC005345.1-201ENST00000431868 217 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 RPL23AP76-201ENST00000441860 458 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AL162151.2-201ENST00000448875 158 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 RAD23BP3-201ENST00000454157 1152 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 USP9YP25-201ENST00000457708 443 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CDK3Q00526 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 RPL29P14-201ENST00000495837 428 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 STMN1P2-201ENST00000508435 439 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK3Q00526 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.06□□□□□ -1.76
CDK3Q00526 AC093755.1-201ENST00000512950 1023 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC108064.1-201ENST00000513791 460 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 IGLV3-26-201ENST00000520756 302 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.06□□□□□ -1.76
CDK3Q00526 MTATP6P24-201ENST00000576835 677 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.06□□□□□ -1.76
CDK3Q00526 MIR5684-201ENST00000585074 65 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 AC133552.5-201ENST00000604266 540 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AL008729.2-201ENST00000606393 473 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.06□□□□□ -1.76
CDK3Q00526 AC064801.1-201ENST00000612025 407 ntBASIC4.06□□□□□ -1.76
CDK3Q00526 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK3Q00526 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.05□□□□□ -1.76
CDK3Q00526 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK3Q00526 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK3Q00526 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK3Q00526 SNORA60-201ENST00000362396 134 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 Y_RNA.126-201ENST00000363382 111 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 RNU6-1243P-201ENST00000364028 107 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 RNU6-921P-201ENST00000384361 107 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK3Q00526 RNU2-42P-201ENST00000410697 113 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC069218.2-201ENST00000411665 344 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 AL161449.1-201ENST00000414531 1199 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 AC092634.6-201ENST00000418558 192 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 MTCO3P1-205ENST00000422088 832 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 RPL7P44-201ENST00000424827 742 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 RPS4XP4-201ENST00000443195 763 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 RPL21P89-201ENST00000444021 467 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AL034418.1-201ENST00000448675 860 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.05□□□□□ -1.76
CDK3Q00526 RPL37P6-202ENST00000464216 403 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC010307.1-201ENST00000467206 836 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC087385.1-201ENST00000475062 312 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK3Q00526 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK3Q00526 MTCYBP16-201ENST00000509187 1129 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC008837.2-201ENST00000513076 418 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 SNORA48.10-201ENST00000516965 160 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 EEF1A1P37-201ENST00000522748 715 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.05□□□□□ -1.76
CDK3Q00526 MTCYBP27-201ENST00000555160 670 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 AC090695.1-201ENST00000561269 1222 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 BNIP3P5-201ENST00000562290 498 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 SNORD39.3-201ENST00000584451 71 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDK3Q00526 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK3Q00526 AL390838.2-201ENST00000602394 274 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 GAS5-AS1-201ENST00000602767 694 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC113368.1-201ENST00000603736 382 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC023158.2-201ENST00000614876 543 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AL356863.1-201ENST00000623378 1080 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AP005264.7-201ENST00000625003 745 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC026634.1-201ENST00000634369 198 ntBASIC4.05□□□□□ -1.76
CDK3Q00526 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
CDK3Q00526 FAM157B-203ENST00000639350 358 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms