Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM4P67936 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 AC245389.2-201ENST00000616023 576 ntBASIC3.7□□□□□ -1.82
TPM4P67936 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.7□□□□□ -1.82
TPM4P67936 AC243756.2-201ENST00000618406 463 ntBASIC3.7□□□□□ -1.82
TPM4P67936 AC242843.1-201ENST00000618702 573 ntBASIC3.7□□□□□ -1.82
TPM4P67936 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.7□□□□□ -1.82
TPM4P67936 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.7□□□□□ -1.82
TPM4P67936 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TPM4P67936 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TPM4P67936 MTND5P3-201ENST00000438536 1800 ntBASIC3.7□□□□□ -1.82
TPM4P67936 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TPM4P67936 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM4P67936 RPL32P3-201ENST00000359025 275 ntBASIC3.69□□□□□ -1.82
TPM4P67936 RNA5SP197-201ENST00000363357 119 ntBASIC3.69□□□□□ -1.82
TPM4P67936 RPL21P3-201ENST00000395517 478 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AL445189.1-201ENST00000405722 338 ntBASIC3.69□□□□□ -1.82
TPM4P67936 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.69□□□□□ -1.82
TPM4P67936 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM4P67936 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM4P67936 AL035423.1-201ENST00000420331 213 ntBASIC3.69□□□□□ -1.82
TPM4P67936 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM4P67936 NDUFA5P10-201ENST00000432147 357 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC244505.4-201ENST00000434905 287 ntBASIC3.69□□□□□ -1.82
TPM4P67936 RPS29P7-201ENST00000439662 171 ntBASIC3.69□□□□□ -1.82
TPM4P67936 SSXP5-201ENST00000443473 287 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 AC146507.2-201ENST00000460608 476 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC104629.2-201ENST00000468627 598 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC093278.1-201ENST00000494700 600 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC093663.1-201ENST00000497190 394 ntBASIC3.69□□□□□ -1.82
TPM4P67936 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
TPM4P67936 RNU1-143P-201ENST00000516296 146 ntBASIC3.69□□□□□ -1.82
TPM4P67936 SNORA70.17-201ENST00000516449 133 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.69□□□□□ -1.82
TPM4P67936 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.69□□□□□ -1.82
TPM4P67936 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 RN7SL703P-201ENST00000578485 302 ntBASIC3.69□□□□□ -1.82
TPM4P67936 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 AC107982.3-201ENST00000584957 985 ntBASIC3.69□□□□□ -1.82
TPM4P67936 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.69□□□□□ -1.82
TPM4P67936 AC117490.2-201ENST00000610042 594 ntBASIC3.69□□□□□ -1.82
TPM4P67936 U1.23-201ENST00000610293 146 ntBASIC3.69□□□□□ -1.82
TPM4P67936 RNU1-68P-201ENST00000615382 146 ntBASIC3.69□□□□□ -1.82
TPM4P67936 U1.39-201ENST00000621562 146 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC091903.1-201ENST00000624322 454 ntBASIC3.69□□□□□ -1.82
TPM4P67936 AC107081.3-201ENST00000612715 2034 ntBASIC3.69□□□□□ -1.82
TPM4P67936 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TPM4P67936 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM4P67936 DDX6P1-205ENST00000441966 1436 ntBASIC3.69□□□□□ -1.82
TPM4P67936 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.69□□□□□ -1.82
TPM4P67936 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TPM4P67936 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TPM4P67936 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 SNORD3H-201ENST00000384486 214 ntBASIC3.68□□□□□ -1.82
TPM4P67936 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM4P67936 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
TPM4P67936 MED6P1-201ENST00000439659 713 ntBASIC3.68□□□□□ -1.82
TPM4P67936 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM4P67936 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM4P67936 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM4P67936 RPS15AP29-201ENST00000445539 400 ntBASIC3.68□□□□□ -1.82
TPM4P67936 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 NDUFA5P9-201ENST00000472609 340 ntBASIC3.68□□□□□ -1.82
TPM4P67936 HPRT1P1-201ENST00000509498 657 ntBASIC3.68□□□□□ -1.82
TPM4P67936 SCARNA20.6-201ENST00000517251 106 ntBASIC3.68□□□□□ -1.82
TPM4P67936 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM4P67936 AP001207.2-201ENST00000519490 539 ntBASIC3.68□□□□□ -1.82
TPM4P67936 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TPM4P67936 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.68□□□□□ -1.82
TPM4P67936 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM4P67936 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
TPM4P67936 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.68□□□□□ -1.82
TPM4P67936 AC011468.4-201ENST00000603942 409 ntBASIC3.68□□□□□ -1.82
TPM4P67936 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.68□□□□□ -1.82
TPM4P67936 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM4P67936 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM4P67936 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM4P67936 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
TPM4P67936 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TPM4P67936 AL356274.2-201ENST00000624379 3752 ntBASIC3.67□□□□□ -1.82
TPM4P67936 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM4P67936 SNORA51.4-201ENST00000364993 124 ntBASIC3.67□□□□□ -1.82
TPM4P67936 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
TPM4P67936 RPL26P37-201ENST00000411983 438 ntBASIC3.67□□□□□ -1.82
TPM4P67936 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms