Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC006499.3-201ENST00000506077 748 ntBASIC2□□□□□ -2.09
RPS28P62857 AC114322.1-201ENST00000506771 926 ntBASIC2□□□□□ -2.09
RPS28P62857 FCF1P8-201ENST00000510322 597 ntBASIC2□□□□□ -2.09
RPS28P62857 OSTC-204ENST00000512478 663 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 SNORA31.21-201ENST00000517180 77 ntBASIC2□□□□□ -2.09
RPS28P62857 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2□□□□□ -2.09
RPS28P62857 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 SOX5P1-201ENST00000524155 1127 ntBASIC2□□□□□ -2.09
RPS28P62857 EIF4EP5-201ENST00000528228 640 ntBASIC2□□□□□ -2.09
RPS28P62857 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AC134349.2-201ENST00000535136 910 ntBASIC2□□□□□ -2.09
RPS28P62857 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC2□□□□□ -2.09
RPS28P62857 AC026333.2-201ENST00000542164 106 ntBASIC2□□□□□ -2.09
RPS28P62857 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPS28P62857 BLZF2P-201ENST00000553776 1130 ntBASIC2□□□□□ -2.09
RPS28P62857 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2□□□□□ -2.09
RPS28P62857 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC2□□□□□ -2.09
RPS28P62857 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 ISCA1P3-201ENST00000577104 373 ntBASIC2□□□□□ -2.09
RPS28P62857 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2□□□□□ -2.09
RPS28P62857 MIR5705-201ENST00000579870 89 ntBASIC2□□□□□ -2.09
RPS28P62857 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
RPS28P62857 AL161629.2-201ENST00000615347 275 ntBASIC2□□□□□ -2.09
RPS28P62857 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC2□□□□□ -2.09
RPS28P62857 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC2□□□□□ -2.09
RPS28P62857 AL139254.3-201ENST00000641097 674 ntBASIC2□□□□□ -2.09
RPS28P62857 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RPS28P62857 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RPS28P62857 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
RPS28P62857 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 AC131280.1-202ENST00000624067 4211 ntBASIC1.99□□□□□ -2.09
RPS28P62857 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 AC017071.1-201ENST00000564407 2204 ntBASIC1.99□□□□□ -2.09
RPS28P62857 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 MIR6073-201ENST00000352083 89 ntBASIC1.99□□□□□ -2.09
RPS28P62857 RNA5SP124-201ENST00000362739 110 ntBASIC1.99□□□□□ -2.09
RPS28P62857 SNORD35B-201ENST00000363660 87 ntBASIC1.99□□□□□ -2.09
RPS28P62857 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RPS28P62857 AC097374.1-203ENST00000400783 485 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 BX284632.2-201ENST00000421091 399 ntBASIC1.99□□□□□ -2.09
RPS28P62857 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RPS28P62857 AC006548.1-201ENST00000427470 102 ntBASIC1.99□□□□□ -2.09
RPS28P62857 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 AC073143.1-201ENST00000436316 395 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 AL512605.1-202ENST00000441919 381 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL359955.2-201ENST00000445380 353 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL139109.1-201ENST00000455491 297 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL356390.1-201ENST00000455684 397 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
RPS28P62857 snoU13.22-201ENST00000459428 104 ntBASIC1.99□□□□□ -2.09
RPS28P62857 MRPL42P6-201ENST00000486397 371 ntBASIC1.99□□□□□ -2.09
RPS28P62857 RPL29P14-201ENST00000495837 428 ntBASIC1.99□□□□□ -2.09
RPS28P62857 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 RNU6-615P-201ENST00000516065 106 ntBASIC1.99□□□□□ -2.09
RPS28P62857 SCARNA18.1-201ENST00000516330 83 ntBASIC1.99□□□□□ -2.09
RPS28P62857 SCARNA20.6-201ENST00000517251 106 ntBASIC1.99□□□□□ -2.09
RPS28P62857 IGLV3-17-201ENST00000519099 244 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AP001207.2-201ENST00000519490 539 ntBASIC1.99□□□□□ -2.09
RPS28P62857 HMGB1P46-201ENST00000520062 610 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 NRBF2P4-201ENST00000520874 850 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.99□□□□□ -2.09
RPS28P62857 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 AL121766.1-201ENST00000547436 487 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.99□□□□□ -2.09
RPS28P62857 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC1.99□□□□□ -2.09
RPS28P62857 DUXAP6-201ENST00000553858 601 ntBASIC1.99□□□□□ -2.09
RPS28P62857 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 AC034105.3-201ENST00000565294 442 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC010546.1-201ENST00000569391 485 ntBASIC1.99□□□□□ -2.09
RPS28P62857 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 AC079089.3-201ENST00000603094 673 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC025588.3-201ENST00000604182 274 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 MIR6793-201ENST00000612376 63 ntBASIC1.99□□□□□ -2.09
RPS28P62857 OSTC-205ENST00000613215 876 ntTSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 CR381572.1-201ENST00000625098 102 ntBASIC1.99□□□□□ -2.09
RPS28P62857 AC068213.1-201ENST00000625124 226 ntBASIC1.99□□□□□ -2.09
RPS28P62857 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC1.99□□□□□ -2.09
RPS28P62857 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms