Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC006363.1-201ENST00000603806 463 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC109309.2-201ENST00000612597 332 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC123768.4-201ENST00000616244 701 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AC002553.4-201ENST00000616896 331 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 AC009268.2-201ENST00000621925 457 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 DUXAP9-208ENST00000622815 614 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 CASC19-264ENST00000641912 1184 ntBASIC4.65□□□□□ -1.67
CLRN1P58418 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLRN1P58418 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLRN1P58418 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CLRN1P58418 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLRN1P58418 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.65□□□□□ -1.67
CLRN1P58418 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.65□□□□□ -1.67
CLRN1P58418 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLRN1P58418 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 U3.7-201ENST00000363668 216 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNU6-1090P-201ENST00000364065 94 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNA5SP90-201ENST00000364801 99 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNU6-744P-201ENST00000365557 107 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 Y_RNA.402-201ENST00000383972 102 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNU1-74P-201ENST00000384108 171 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNU6-1316P-201ENST00000384242 108 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNU6-114P-201ENST00000384704 105 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AL024474.1-201ENST00000404655 591 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.64□□□□□ -1.67
CLRN1P58418 RNU2-50P-201ENST00000410494 143 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC099336.2-201ENST00000422457 254 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC093655.2-201ENST00000425735 631 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 ZNF863P-201ENST00000426746 417 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 MTCO3P18-201ENST00000440206 761 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AL391987.1-201ENST00000441025 200 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 FAM103A2P-201ENST00000444122 354 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC004980.3-201ENST00000447046 365 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 EEF1A1P1-201ENST00000447052 739 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC005297.2-201ENST00000450430 606 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 BX842559.2-201ENST00000451418 605 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.64□□□□□ -1.67
CLRN1P58418 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 C1DP4-201ENST00000455429 424 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC099560.2-201ENST00000457554 255 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 EIF3LP3-201ENST00000495197 822 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.64□□□□□ -1.67
CLRN1P58418 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.64□□□□□ -1.67
CLRN1P58418 Y_RNA.672-201ENST00000516289 104 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 RNA5SP373-201ENST00000517271 95 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CLRN1P58418 IGKV3D-34-201ENST00000522638 302 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC027369.5-201ENST00000533838 755 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AL049779.2-201ENST00000553847 315 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.64□□□□□ -1.67
CLRN1P58418 HMGB1P33-201ENST00000563485 527 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC012146.2-201ENST00000576545 416 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC127024.5-201ENST00000580085 462 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.64□□□□□ -1.67
CLRN1P58418 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC069307.1-201ENST00000602820 447 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC008814.1-201ENST00000603797 406 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC005191.1-201ENST00000603950 358 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC118658.2-201ENST00000618697 459 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC000123.2-201ENST00000623124 461 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AL355480.1-201ENST00000629041 99 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC135068.12-201ENST00000637370 931 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.64□□□□□ -1.67
CLRN1P58418 AL049780.3-201ENST00000624612 1583 ntBASIC4.64□□□□□ -1.67
CLRN1P58418 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.64□□□□□ -1.67
CLRN1P58418 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLRN1P58418 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.63□□□□□ -1.67
CLRN1P58418 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.63□□□□□ -1.67
CLRN1P58418 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms