Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MIR4444-1-201ENST00000581696 74 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 MIR4444-2-201ENST00000584390 74 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 SNRPGP15-201ENST00000600149 222 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 AC007566.2-201ENST00000603642 413 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 AC011468.4-201ENST00000603942 409 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 AL355802.4-201ENST00000607635 548 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 AL392048.1-201ENST00000613946 534 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN18P56856 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN18P56856 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
CLDN18P56856 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN18P56856 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN18P56856 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN18P56856 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN18P56856 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN18P56856 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN18P56856 BDP1P-201ENST00000582658 1990 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CLDN18P56856 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 AC090337.1-201ENST00000579651 2074 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC000367.1-201ENST00000452711 1766 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AL512646.1-201ENST00000269395 1077 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 SNORA51.2-201ENST00000364595 132 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN18P56856 AC073264.1-201ENST00000411508 416 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 SYF2P2-201ENST00000417620 583 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN18P56856 MTND4P24-201ENST00000424002 397 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 HIGD1AP12-201ENST00000427832 281 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 MTCO1P43-201ENST00000431831 488 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 CYCSP43-201ENST00000438233 310 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC068135.1-201ENST00000446164 246 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC233982.1-201ENST00000451247 436 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC022034.3-201ENST00000471393 478 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN18P56856 RPL23AP55-201ENST00000498163 452 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN18P56856 TMEM248P1-201ENST00000510579 951 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC026403.1-201ENST00000518938 295 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 SUMO2P20-201ENST00000520803 283 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 AC125494.3-201ENST00000602759 455 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC091488.1-201ENST00000604239 660 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN18P56856 AL162233.1-201ENST00000620014 944 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN18P56856 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN18P56856 AL590396.2-201ENST00000636511 1041 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 AC104446.1-201ENST00000613728 1321 ntBASIC3.34□□□□□ -1.87
CLDN18P56856 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN18P56856 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.34□□□□□ -1.88
CLDN18P56856 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
CLDN18P56856 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
CLDN18P56856 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.88
CLDN18P56856 AC046144.1-201ENST00000478559 1853 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN18P56856 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLDN18P56856 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN18P56856 SNORA7.2-201ENST00000364446 145 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 SNORA51.12-201ENST00000384448 134 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLDN18P56856 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 MTCYBP24-201ENST00000420387 1106 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AL389915.1-201ENST00000422463 466 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 UBE2V1P1-201ENST00000430836 445 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 NEK4P1-201ENST00000433383 879 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 ARL4AP4-201ENST00000434170 518 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 AF228730.2-201ENST00000438784 848 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 RPS4XP13-201ENST00000483219 789 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 TRBV12-2-201ENST00000489763 344 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN18P56856 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 AC008565.1-201ENST00000509046 885 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN18P56856 OR7E13P-201ENST00000526052 910 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN18P56856 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN18P56856 AC006960.3-201ENST00000561845 705 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN18P56856 BX322635.1-201ENST00000605804 496 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
CLDN18P56856 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN18P56856 AC024595.1-201ENST00000623088 387 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms