Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SUMO3P55854 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.57□□□□□ -1.68
SUMO3P55854 AL450345.1-202ENST00000605741 3881 ntBASIC4.57□□□□□ -1.68
SUMO3P55854 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.57□□□□□ -1.68
SUMO3P55854 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SUMO3P55854 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 MTND4P26-201ENST00000415971 1359 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SUMO3P55854 Y_RNA.359-201ENST00000365498 102 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 RNU6-339P-201ENST00000384310 107 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 MIR153-1-201ENST00000384914 90 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 MT-TC-201ENST00000387405 66 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 MIR1178-201ENST00000408396 91 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 RNU2-16P-201ENST00000410712 136 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC013429.2-201ENST00000418798 781 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 RPS27AP12-201ENST00000429552 465 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 EZH2P1-201ENST00000431167 291 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 SKP1P1-201ENST00000438081 489 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL450023.3-201ENST00000440592 271 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 RPL7P36-201ENST00000444633 681 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 RPL29P29-201ENST00000448725 423 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 TCEA1P1-201ENST00000449716 880 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC010733.1-201ENST00000451515 401 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.56□□□□□ -1.68
SUMO3P55854 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC074386.1-201ENST00000476560 767 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 BX284632.1-201ENST00000478218 541 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 HMGB1P36-201ENST00000487709 576 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC093267.1-201ENST00000489176 961 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AP001025.2-201ENST00000490908 477 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC034222.1-201ENST00000494052 532 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 RPL23AP53-201ENST00000521854 457 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 MTND4LP18-201ENST00000526864 291 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.56□□□□□ -1.68
SUMO3P55854 HMGN2P6-201ENST00000551091 273 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 AL359219.2-201ENST00000555184 348 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 AC019322.1-201ENST00000571869 389 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC005951.1-201ENST00000576706 485 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC090615.1-201ENST00000577519 154 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 MIR5697-201ENST00000578045 78 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC087683.1-201ENST00000591187 441 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC078795.2-201ENST00000602835 1252 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 AC093799.2-201ENST00000610062 578 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL627230.1-201ENST00000613077 211 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL591926.8-201ENST00000616876 211 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AC009704.2-201ENST00000618739 483 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AP002799.1-201ENST00000623552 423 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 CRYM-AS1-204ENST00000637983 556 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SUMO3P55854 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
SUMO3P55854 MTCO1P24-201ENST00000515438 1558 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 AL049780.3-201ENST00000624612 1583 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 ADAM5-202ENST00000399789 1942 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
SUMO3P55854 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SUMO3P55854 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SUMO3P55854 TEX21P-201ENST00000447107 1476 ntBASIC4.56□□□□□ -1.68
SUMO3P55854 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms