Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.24□□□□□ -1.73
LIMK1P53667 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LIMK1P53667 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.24□□□□□ -1.73
LIMK1P53667 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 AL645568.2-201ENST00000432815 1337 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
LIMK1P53667 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 SNORD6-201ENST00000365444 73 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 RNU6-1293P-201ENST00000384077 107 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 MIR16-1-201ENST00000385271 89 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AL590704.1-201ENST00000402856 794 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 SFR1P1-201ENST00000403720 688 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 BTBD10P2-201ENST00000404779 676 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 RNU2-37P-201ENST00000410695 177 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 OR51A3P-201ENST00000413596 924 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC092647.1-201ENST00000420654 287 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.23□□□□□ -1.73
LIMK1P53667 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 AL157831.1-201ENST00000426134 473 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC092634.2-201ENST00000428146 1010 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 OR51AB1P-201ENST00000429046 620 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 RPL21P91-201ENST00000429231 479 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.23□□□□□ -1.73
LIMK1P53667 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 AL356276.2-201ENST00000435919 558 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 snoU13.7-201ENST00000459220 104 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC108022.1-201ENST00000493466 478 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 SNORA70.14-201ENST00000516205 110 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC008694.2-201ENST00000517591 306 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC004217.3-201ENST00000551552 878 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC044913.1-201ENST00000557200 430 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.23□□□□□ -1.73
LIMK1P53667 RPL21P12-201ENST00000559810 515 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 AL606490.9-201ENST00000603331 271 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC096577.2-201ENST00000611455 153 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC104763.3-201ENST00000613765 618 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 AC018816.2-201ENST00000621460 353 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 RNU6-156P-201ENST00000621869 107 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 ZNF663P-202ENST00000641770 1131 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LIMK1P53667 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LIMK1P53667 AC073346.2-201ENST00000624724 2058 ntBASIC4.23□□□□□ -1.73
LIMK1P53667 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.23□□□□□ -1.73
LIMK1P53667 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LIMK1P53667 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
LIMK1P53667 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.22□□□□□ -1.73
LIMK1P53667 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 AC107068.1-201ENST00000563286 4218 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LIMK1P53667 SNORA31-201ENST00000362607 130 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 RHOT1P2-201ENST00000366423 333 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LIMK1P53667 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LIMK1P53667 RNU6-224P-201ENST00000384055 107 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 RNU6-1151P-201ENST00000384684 107 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 MIR34B-201ENST00000385076 84 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AL355379.1-201ENST00000405542 640 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 VN1R8P-201ENST00000407739 893 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 USP9YP21-201ENST00000420603 432 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AC093698.1-201ENST00000423843 571 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 OR4F13P-201ENST00000428478 931 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.22□□□□□ -1.73
LIMK1P53667 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms