Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC012557.2-201ENST00000605919 418 ntBASIC4.82□□□□□ -1.64
COPAP53621 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.82□□□□□ -1.64
COPAP53621 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COPAP53621 AC092184.1-201ENST00000625042 715 ntBASIC4.82□□□□□ -1.64
COPAP53621 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COPAP53621 AL596275.2-204ENST00000641628 552 ntBASIC4.82□□□□□ -1.64
COPAP53621 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COPAP53621 AL596275.2-206ENST00000641957 626 ntBASIC4.82□□□□□ -1.64
COPAP53621 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COPAP53621 AL133243.3-201ENST00000617415 3004 ntBASIC4.82□□□□□ -1.64
COPAP53621 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
COPAP53621 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.82□□□□□ -1.64
COPAP53621 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
COPAP53621 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 AC108751.5-201ENST00000492880 1336 ntBASIC4.81□□□□□ -1.64
COPAP53621 OR5BR1P-201ENST00000524992 1330 ntBASIC4.81□□□□□ -1.64
COPAP53621 OR4A15-201ENST00000314706 1035 ntBASIC4.81□□□□□ -1.64
COPAP53621 RNU1-83P-201ENST00000363426 164 ntBASIC4.81□□□□□ -1.64
COPAP53621 RN7SKP44-201ENST00000363602 316 ntBASIC4.81□□□□□ -1.64
COPAP53621 RNU6-441P-201ENST00000384545 106 ntBASIC4.81□□□□□ -1.64
COPAP53621 SNORD96B-201ENST00000386148 79 ntBASIC4.81□□□□□ -1.64
COPAP53621 ATP5F1P4-201ENST00000397288 746 ntBASIC4.81□□□□□ -1.64
COPAP53621 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.81□□□□□ -1.64
COPAP53621 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.81□□□□□ -1.64
COPAP53621 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 AL117351.1-201ENST00000438864 766 ntBASIC4.81□□□□□ -1.64
COPAP53621 MTND2P19-201ENST00000449129 1012 ntBASIC4.81□□□□□ -1.64
COPAP53621 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.81□□□□□ -1.64
COPAP53621 RPL23AP35-201ENST00000451906 501 ntBASIC4.81□□□□□ -1.64
COPAP53621 MTCO3P11-201ENST00000455103 774 ntBASIC4.81□□□□□ -1.64
COPAP53621 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 MTND2P28-201ENST00000457540 1044 ntBASIC4.81□□□□□ -1.64
COPAP53621 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 AC093267.1-201ENST00000489176 961 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.81□□□□□ -1.64
COPAP53621 AC091435.1-201ENST00000505442 584 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC021146.3-201ENST00000511911 260 ntBASIC4.81□□□□□ -1.64
COPAP53621 RNU1-6P-201ENST00000516290 144 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.81□□□□□ -1.64
COPAP53621 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 AP005136.1-201ENST00000579765 429 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.81□□□□□ -1.64
COPAP53621 AC005191.1-201ENST00000603950 358 ntBASIC4.81□□□□□ -1.64
COPAP53621 AL353600.1-201ENST00000608148 251 ntBASIC4.81□□□□□ -1.64
COPAP53621 AP001521.1-201ENST00000609150 300 ntBASIC4.81□□□□□ -1.64
COPAP53621 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.81□□□□□ -1.64
COPAP53621 MIR6864-201ENST00000617935 70 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC092650.2-201ENST00000619984 902 ntBASIC4.81□□□□□ -1.64
COPAP53621 AC007494.3-201ENST00000624660 743 ntBASIC4.81□□□□□ -1.64
COPAP53621 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 FP325313.1-201ENST00000638228 703 ntBASIC4.81□□□□□ -1.64
COPAP53621 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 AC018529.3-201ENST00000624212 2254 ntBASIC4.81□□□□□ -1.64
COPAP53621 AL672167.1-203ENST00000641299 2975 ntBASIC4.81□□□□□ -1.64
COPAP53621 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COPAP53621 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.81□□□□□ -1.64
COPAP53621 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COPAP53621 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.8□□□□□ -1.64
COPAP53621 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 ZNF37BP-203ENST00000452306 1352 ntBASIC4.8□□□□□ -1.64
COPAP53621 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 OR11H5P-202ENST00000641612 1325 ntBASIC4.8□□□□□ -1.64
COPAP53621 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 RPL32P3-201ENST00000359025 275 ntBASIC4.8□□□□□ -1.64
COPAP53621 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COPAP53621 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COPAP53621 U3.15-201ENST00000365398 212 ntBASIC4.8□□□□□ -1.64
COPAP53621 RNU6-657P-201ENST00000383904 107 ntBASIC4.8□□□□□ -1.64
COPAP53621 RNU6-921P-201ENST00000384361 107 ntBASIC4.8□□□□□ -1.64
COPAP53621 MIR129-1-201ENST00000384972 72 ntBASIC4.8□□□□□ -1.64
COPAP53621 MIR506-201ENST00000384998 124 ntBASIC4.8□□□□□ -1.64
COPAP53621 RNA5SP397-201ENST00000391323 118 ntBASIC4.8□□□□□ -1.64
COPAP53621 U3.35-201ENST00000408405 208 ntBASIC4.8□□□□□ -1.64
COPAP53621 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.8□□□□□ -1.64
COPAP53621 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 USP9YP33-201ENST00000412220 421 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC004022.2-201ENST00000413824 193 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms