Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TPMTP4-201ENST00000450749 678 ntBASIC4.76□□□□□ -1.65
COPB1P53618 RPL12P26-201ENST00000452430 487 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AL133244.1-201ENST00000456007 258 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC010326.1-201ENST00000462726 602 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC053481.1-201ENST00000467217 306 ntBASIC4.76□□□□□ -1.65
COPB1P53618 RN7SL385P-201ENST00000468873 276 ntBASIC4.76□□□□□ -1.65
COPB1P53618 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.76□□□□□ -1.65
COPB1P53618 MTND4P2-201ENST00000507767 1203 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 RNA5SP135-201ENST00000517019 125 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AF186190.1-201ENST00000517470 480 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 OR5AN2P-201ENST00000534535 896 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC004217.3-201ENST00000551552 878 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC122134.1-201ENST00000565664 1104 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC090751.1-201ENST00000566966 267 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.76□□□□□ -1.65
COPB1P53618 AC012213.3-201ENST00000577199 777 ntBASIC4.76□□□□□ -1.65
COPB1P53618 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 AL390838.2-201ENST00000602394 274 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AF131215.7-201ENST00000602443 707 ntBASIC4.76□□□□□ -1.65
COPB1P53618 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
COPB1P53618 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AL158063.1-201ENST00000615349 536 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC009237.17-201ENST00000618111 748 ntBASIC4.76□□□□□ -1.65
COPB1P53618 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
COPB1P53618 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.76□□□□□ -1.65
COPB1P53618 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.76□□□□□ -1.65
COPB1P53618 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 ASNSP1-204ENST00000641977 1664 ntBASIC4.76□□□□□ -1.65
COPB1P53618 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COPB1P53618 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 ZNF833P-201ENST00000424938 1494 ntBASIC4.75□□□□□ -1.65
COPB1P53618 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.75□□□□□ -1.65
COPB1P53618 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 AC092104.1-201ENST00000497346 1441 ntBASIC4.75□□□□□ -1.65
COPB1P53618 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COPB1P53618 AC008033.1-201ENST00000216407 1162 ntBASIC4.75□□□□□ -1.65
COPB1P53618 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 Y_RNA.311-201ENST00000365068 96 ntBASIC4.75□□□□□ -1.65
COPB1P53618 SNORA62-201ENST00000365493 153 ntBASIC4.75□□□□□ -1.65
COPB1P53618 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.75□□□□□ -1.65
COPB1P53618 SNORA70F-201ENST00000384142 135 ntBASIC4.75□□□□□ -1.65
COPB1P53618 RNU6-398P-201ENST00000384143 109 ntBASIC4.75□□□□□ -1.65
COPB1P53618 FABP12P1-201ENST00000401911 322 ntBASIC4.75□□□□□ -1.65
COPB1P53618 RNU6-920P-201ENST00000410926 92 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC004690.1-201ENST00000418216 328 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 AC009480.2-201ENST00000422916 432 ntBASIC4.75□□□□□ -1.65
COPB1P53618 RPL7P4-203ENST00000430239 730 ntBASIC4.75□□□□□ -1.65
COPB1P53618 MTCO3P21-201ENST00000430791 643 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.75□□□□□ -1.65
COPB1P53618 MTND6P18-201ENST00000439477 513 ntBASIC4.75□□□□□ -1.65
COPB1P53618 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 AC010469.1-201ENST00000463864 576 ntBASIC4.75□□□□□ -1.65
COPB1P53618 RN7SL354P-201ENST00000469282 294 ntBASIC4.75□□□□□ -1.65
COPB1P53618 NCOR1P1-202ENST00000486162 291 ntBASIC4.75□□□□□ -1.65
COPB1P53618 PARP4P3-201ENST00000510265 317 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.75□□□□□ -1.65
COPB1P53618 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 OR5BC1P-201ENST00000529327 739 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC092851.1-201ENST00000535964 478 ntBASIC4.75□□□□□ -1.65
COPB1P53618 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.75□□□□□ -1.65
COPB1P53618 AL121766.1-201ENST00000547436 487 ntBASIC4.75□□□□□ -1.65
COPB1P53618 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.75□□□□□ -1.65
COPB1P53618 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.75□□□□□ -1.65
COPB1P53618 MIR4284-201ENST00000578924 81 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.75□□□□□ -1.65
COPB1P53618 NTAN1P1-201ENST00000603150 646 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC079587.1-201ENST00000603846 277 ntBASIC4.75□□□□□ -1.65
COPB1P53618 RN7SKP299-201ENST00000606679 301 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.75□□□□□ -1.65
COPB1P53618 AC019193.2-201ENST00000610012 634 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC008083.4-201ENST00000615076 444 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC069209.1-201ENST00000619282 651 ntBASIC4.75□□□□□ -1.65
COPB1P53618 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AC015726.3-201ENST00000624501 418 ntBASIC4.75□□□□□ -1.65
COPB1P53618 AL049536.1-201ENST00000625043 744 ntBASIC4.75□□□□□ -1.65
COPB1P53618 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COPB1P53618 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
COPB1P53618 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COPB1P53618 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 AC011477.1-204ENST00000623416 1325 ntBASIC4.74□□□□□ -1.65
COPB1P53618 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COPB1P53618 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COPB1P53618 MIR448-201ENST00000362131 111 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms