Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR2JP52435 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR2JP52435 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.88□□□□□ -1.95
POLR2JP52435 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR2JP52435 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
POLR2JP52435 AC000367.1-201ENST00000452711 1766 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 PHKBP1-201ENST00000450951 1951 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2JP52435 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2JP52435 DYNLT3P1-201ENST00000378574 347 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AL356806.1-201ENST00000422524 916 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 GOT2P5-201ENST00000433995 546 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 CASP3P1-201ENST00000446037 609 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2JP52435 RPL21P18-201ENST00000469899 480 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AC037198.2-201ENST00000478845 733 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 RN7SL293P-201ENST00000481765 281 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AL133372.1-201ENST00000493565 745 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 AC006499.5-201ENST00000505037 514 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.87□□□□□ -1.95
POLR2JP52435 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
POLR2JP52435 MTND2P17-201ENST00000550281 688 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 AC093227.2-201ENST00000589357 285 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR2JP52435 XIST_intron.1-201ENST00000619444 68 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR2JP52435 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
POLR2JP52435 SEPT7P7-201ENST00000420492 1301 ntBASIC2.87□□□□□ -1.95
POLR2JP52435 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.87□□□□□ -1.95
POLR2JP52435 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR2JP52435 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
POLR2JP52435 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR2JP52435 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR2JP52435 AL035425.3-201ENST00000564206 4996 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 XPOTP1-201ENST00000443317 2398 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 RPS7P15-201ENST00000415804 584 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 AL451074.5-201ENST00000415894 435 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 RPL36AP36-201ENST00000418616 301 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 RPL23AP4-201ENST00000427757 463 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 AL592437.1-201ENST00000443781 492 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR2JP52435 Z75741.1-201ENST00000446793 314 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 GAPDHP27-201ENST00000447427 1020 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 PDSS1P2-201ENST00000449397 678 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 RPL7P31-201ENST00000450192 724 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR2JP52435 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR2JP52435 AC023632.4-201ENST00000517783 191 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR2JP52435 MTCO1P49-201ENST00000523429 802 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR2JP52435 AC084757.1-201ENST00000559987 490 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 AC005242.1-201ENST00000585658 438 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 AC006130.2-201ENST00000586202 326 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR2JP52435 AL020991.1-201ENST00000612314 373 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR2JP52435 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.86□□□□□ -1.95
POLR2JP52435 AC084035.1-201ENST00000634543 607 ntBASIC2.86□□□□□ -1.95
POLR2JP52435 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR2JP52435 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR2JP52435 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
POLR2JP52435 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR2JP52435 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
POLR2JP52435 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR2JP52435 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR2JP52435 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
POLR2JP52435 RNU4-47P-201ENST00000410876 114 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR2JP52435 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR2JP52435 Z95327.1-201ENST00000446082 482 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 PRELID3BP6-201ENST00000503839 571 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR2JP52435 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR2JP52435 RNA5SP385-201ENST00000515947 110 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 RNU6-943P-201ENST00000516960 98 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR2JP52435 OR5D17P-201ENST00000531492 978 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR2JP52435 AL121839.1-201ENST00000556233 1185 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AC034105.3-201ENST00000565294 442 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR2JP52435 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR2JP52435 AL031985.2-201ENST00000600955 480 ntBASIC2.85□□□□□ -1.95
POLR2JP52435 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR2JP52435 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR2JP52435 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms