Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC073530.2-201ENST00000623987 261 ntBASIC4.14□□□□□ -1.75
LHX1P48742 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 BMS1P21-201ENST00000634565 365 ntBASIC4.14□□□□□ -1.75
LHX1P48742 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LHX1P48742 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
LHX1P48742 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
LHX1P48742 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LHX1P48742 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LHX1P48742 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.14□□□□□ -1.75
LHX1P48742 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 AL049555.1-201ENST00000562834 1933 ntBASIC4.13□□□□□ -1.75
LHX1P48742 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 RNU6-619P-201ENST00000365146 108 ntBASIC4.13□□□□□ -1.75
LHX1P48742 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 RNU6-1293P-201ENST00000384077 107 ntBASIC4.13□□□□□ -1.75
LHX1P48742 CYCSP19-201ENST00000411715 316 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AL450992.3-201ENST00000413192 568 ntBASIC4.13□□□□□ -1.75
LHX1P48742 MTCYBP32-201ENST00000427945 1084 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AL357520.1-201ENST00000441557 453 ntBASIC4.13□□□□□ -1.75
LHX1P48742 RRM2P4-201ENST00000441721 562 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.13□□□□□ -1.75
LHX1P48742 AL031313.1-201ENST00000448435 256 ntBASIC4.13□□□□□ -1.75
LHX1P48742 GAPDHP39-201ENST00000481866 979 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.13□□□□□ -1.75
LHX1P48742 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.13□□□□□ -1.75
LHX1P48742 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.13□□□□□ -1.75
LHX1P48742 AC005351.1-201ENST00000511152 786 ntBASIC4.13□□□□□ -1.75
LHX1P48742 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 RNU6-488P-201ENST00000515918 99 ntBASIC4.13□□□□□ -1.75
LHX1P48742 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.13□□□□□ -1.75
LHX1P48742 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 MIR4666A-201ENST00000580160 79 ntBASIC4.13□□□□□ -1.75
LHX1P48742 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.13□□□□□ -1.75
LHX1P48742 AL365400.2-201ENST00000605604 902 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AC017076.1-201ENST00000607613 578 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AC027449.1-201ENST00000608890 407 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AP005137.2-201ENST00000609238 400 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 AC123767.1-202ENST00000620407 817 ntBASIC4.13□□□□□ -1.75
LHX1P48742 RNU6-156P-201ENST00000621869 107 ntBASIC4.13□□□□□ -1.75
LHX1P48742 AL161637.1-201ENST00000622380 412 ntBASIC4.13□□□□□ -1.75
LHX1P48742 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.13□□□□□ -1.75
LHX1P48742 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LHX1P48742 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.13□□□□□ -1.75
LHX1P48742 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LHX1P48742 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 AP004289.2-201ENST00000444413 1457 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AL592437.2-201ENST00000421655 2434 ntBASIC4.12□□□□□ -1.75
LHX1P48742 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
LHX1P48742 U1.1-201ENST00000384101 164 ntBASIC4.12□□□□□ -1.75
LHX1P48742 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
LHX1P48742 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
LHX1P48742 TMSB4XP8-201ENST00000402089 135 ntBASIC4.12□□□□□ -1.75
LHX1P48742 RN7SKP156-201ENST00000410308 342 ntBASIC4.12□□□□□ -1.75
LHX1P48742 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.12□□□□□ -1.75
LHX1P48742 TMSB4XP6-201ENST00000415187 135 ntBASIC4.12□□□□□ -1.75
LHX1P48742 HSFY1P1-201ENST00000423928 1178 ntBASIC4.12□□□□□ -1.75
LHX1P48742 TMSB4XP1-201ENST00000424567 135 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.12□□□□□ -1.75
LHX1P48742 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.12□□□□□ -1.75
LHX1P48742 AC007389.2-201ENST00000434630 306 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AC096638.2-201ENST00000434965 711 ntBASIC4.12□□□□□ -1.75
LHX1P48742 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 YWHAZP8-201ENST00000436935 731 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 AC104306.1-201ENST00000449702 371 ntBASIC4.12□□□□□ -1.75
LHX1P48742 MRPL42P4-201ENST00000453267 443 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.12□□□□□ -1.75
LHX1P48742 RPS15AP1-201ENST00000457423 391 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LHX1P48742 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.12□□□□□ -1.75
LHX1P48742 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.12□□□□□ -1.75
LHX1P48742 OR7E13P-201ENST00000526052 910 ntBASIC4.12□□□□□ -1.75
LHX1P48742 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.12□□□□□ -1.75
LHX1P48742 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.12□□□□□ -1.75
LHX1P48742 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.12□□□□□ -1.75
LHX1P48742 AC034105.4-201ENST00000568304 277 ntBASIC4.12□□□□□ -1.75
LHX1P48742 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms