Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL713922.2-201ENST00000619384 716 ntBASIC3.39□□□□□ -1.87
RPA3P35244 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
RPA3P35244 C2orf27A-204ENST00000623058 969 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AC243312.2-201ENST00000623340 601 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.39□□□□□ -1.87
RPA3P35244 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
RPA3P35244 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
RPA3P35244 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPA3P35244 ELL2P4-201ENST00000446870 1376 ntBASIC3.38□□□□□ -1.87
RPA3P35244 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPA3P35244 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPA3P35244 SYT14P1-202ENST00000600441 1448 ntBASIC3.38□□□□□ -1.87
RPA3P35244 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RPA3P35244 MIR421-201ENST00000365696 85 ntBASIC3.38□□□□□ -1.87
RPA3P35244 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPA3P35244 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPA3P35244 RNU2-65P-201ENST00000410162 185 ntBASIC3.38□□□□□ -1.87
RPA3P35244 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
RPA3P35244 BX842559.1-201ENST00000419615 532 ntBASIC3.38□□□□□ -1.87
RPA3P35244 AC017083.1-201ENST00000428093 483 ntBASIC3.38□□□□□ -1.87
RPA3P35244 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.38□□□□□ -1.87
RPA3P35244 RPS24P8-201ENST00000431490 402 ntBASIC3.38□□□□□ -1.87
RPA3P35244 HMGN2P31-201ENST00000432430 273 ntBASIC3.38□□□□□ -1.87
RPA3P35244 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 RPL21P23-201ENST00000446654 460 ntBASIC3.38□□□□□ -1.87
RPA3P35244 PLGLA-201ENST00000465668 449 ntBASIC3.38□□□□□ -1.87
RPA3P35244 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.38□□□□□ -1.87
RPA3P35244 HMGN1P15-201ENST00000513870 295 ntBASIC3.38□□□□□ -1.87
RPA3P35244 RN7SKP157-201ENST00000516174 282 ntBASIC3.38□□□□□ -1.87
RPA3P35244 Vault.1-201ENST00000516474 102 ntBASIC3.38□□□□□ -1.87
RPA3P35244 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.38□□□□□ -1.87
RPA3P35244 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.38□□□□□ -1.87
RPA3P35244 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RPA3P35244 OR5B10P-201ENST00000532869 642 ntBASIC3.38□□□□□ -1.87
RPA3P35244 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 MIR1254-2-201ENST00000579553 63 ntBASIC3.38□□□□□ -1.87
RPA3P35244 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.38□□□□□ -1.87
RPA3P35244 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RPA3P35244 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPA3P35244 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPA3P35244 U3.11-201ENST00000364476 212 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 MTCO3P31-201ENST00000405526 789 ntBASIC3.37□□□□□ -1.87
RPA3P35244 RN7SKP27-201ENST00000410684 333 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
RPA3P35244 CRYBB2P1-203ENST00000415709 538 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RPA3P35244 AC069157.1-201ENST00000421749 137 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.37□□□□□ -1.87
RPA3P35244 MED6P1-201ENST00000439659 713 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AC092641.1-201ENST00000440229 772 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
RPA3P35244 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 RPL21P71-201ENST00000465598 459 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AC087385.1-201ENST00000475062 312 ntBASIC3.37□□□□□ -1.87
RPA3P35244 RPL23AP44-201ENST00000482216 473 ntBASIC3.37□□□□□ -1.87
RPA3P35244 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 AC092045.1-201ENST00000495716 1231 ntBASIC3.37□□□□□ -1.87
RPA3P35244 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.37□□□□□ -1.87
RPA3P35244 KCTD9P5-201ENST00000504141 1170 ntBASIC3.37□□□□□ -1.87
RPA3P35244 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.37□□□□□ -1.87
RPA3P35244 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 RNA5SP309-201ENST00000516670 106 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
RPA3P35244 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.37□□□□□ -1.87
RPA3P35244 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.37□□□□□ -1.87
RPA3P35244 MTND4LP24-201ENST00000572277 291 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL365400.2-201ENST00000605604 902 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AC135803.1-201ENST00000608748 565 ntBASIC3.37□□□□□ -1.87
RPA3P35244 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 AC244258.1-201ENST00000637553 1071 ntBASIC3.37□□□□□ -1.87
RPA3P35244 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RPA3P35244 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPA3P35244 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
RPA3P35244 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.36□□□□□ -1.87
RPA3P35244 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.36□□□□□ -1.87
RPA3P35244 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
RPA3P35244 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPA3P35244 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RPA3P35244 AC105402.1-201ENST00000413336 545 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms