Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC12P31275 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC006210.2-201ENST00000367074 1545 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXC12P31275 MIR375-201ENST00000362103 64 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RNA5SP258-201ENST00000362750 119 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 SNORD1C-201ENST00000363315 78 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RNU1-130P-201ENST00000363930 160 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RNU6-169P-201ENST00000365336 107 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 RPS4XP8-201ENST00000402039 771 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 EIF4A1P3-201ENST00000411521 244 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC015977.1-201ENST00000418887 292 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RPL34P3-201ENST00000421454 338 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXC12P31275 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 RPS20P1-201ENST00000434853 354 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 AL663074.2-201ENST00000440621 479 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 AL445687.2-201ENST00000458156 728 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC12P31275 NIFKP7-201ENST00000503365 834 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RN7SKP67-201ENST00000515905 235 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC022616.3-201ENST00000523940 148 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC12P31275 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC018552.3-201ENST00000567416 561 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC060771.1-201ENST00000582031 164 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXC12P31275 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC12P31275 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 AC025449.1-201ENST00000603896 529 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 RNU4-89P-201ENST00000607443 133 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC128687.2-201ENST00000609657 566 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AL049794.2-201ENST00000616301 365 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 AC010338.1-201ENST00000621823 717 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC018445.2-201ENST00000622987 260 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AL691477.1-201ENST00000624398 162 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC024614.3-201ENST00000637860 256 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 AC092326.2-201ENST00000624772 1561 ntBASIC5.19□□□□□ -1.58
HOXC12P31275 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC12P31275 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC12P31275 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HOXC12P31275 AC087516.1-201ENST00000561236 2428 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 AL022322.2-201ENST00000624072 20397 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 AC114546.3-201ENST00000623582 1734 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC12P31275 OR52B1P-201ENST00000316506 909 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 RNU6-1120P-201ENST00000362988 108 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 Y_RNA.86-201ENST00000363020 111 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 RNU1-19P-201ENST00000363306 165 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 RNY3P3-201ENST00000363816 102 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HOXC12P31275 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HOXC12P31275 MT-TD-201ENST00000387419 68 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXC12P31275 SPTLC1P2-201ENST00000407089 121 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC12P31275 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC12P31275 RPS4XP5-201ENST00000419038 768 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC12P31275 MTND1P14-201ENST00000427400 950 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC12P31275 AL606489.2-201ENST00000433886 234 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 RPL12P46-201ENST00000436610 195 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 GAPDHP58-201ENST00000438477 1006 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 SEPT14P3-201ENST00000439401 183 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 AC023141.8-201ENST00000442554 208 ntBASIC5.18□□□□□ -1.58
HOXC12P31275 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC12P31275 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC12P31275 AL732372.2-207ENST00000445840 183 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms