Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A5P29400 SETP1-201ENST00000556014 845 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 AC006272.2-201ENST00000594725 163 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 AC112503.1-201ENST00000608436 391 ntBASIC3.59□□□□□ -1.83
COL4A5P29400 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.59□□□□□ -1.83
COL4A5P29400 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A5P29400 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
COL4A5P29400 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL4A5P29400 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
COL4A5P29400 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.59□□□□□ -1.83
COL4A5P29400 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.59□□□□□ -1.83
COL4A5P29400 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.59□□□□□ -1.84
COL4A5P29400 SCN1A-220ENST00000641603 12506 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 RANP4-201ENST00000413361 655 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.59□□□□□ -1.84
COL4A5P29400 RPL21P40-201ENST00000428586 483 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC087499.2-201ENST00000432861 149 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 RPL5P16-201ENST00000471467 790 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC012123.2-201ENST00000485809 248 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.59□□□□□ -1.84
COL4A5P29400 RN7SKP272-201ENST00000516988 232 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.59□□□□□ -1.84
COL4A5P29400 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.59□□□□□ -1.84
COL4A5P29400 HMGN2P47-201ENST00000559378 272 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC234778.2-201ENST00000566241 354 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.59□□□□□ -1.84
COL4A5P29400 AC007566.2-201ENST00000603642 413 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AL035413.2-201ENST00000604801 525 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC087241.4-201ENST00000612441 480 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.59□□□□□ -1.84
COL4A5P29400 AC007318.2-201ENST00000620999 243 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 MIR4727-201ENST00000622232 55 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 AC091903.1-201ENST00000624322 454 ntBASIC3.59□□□□□ -1.84
COL4A5P29400 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.59□□□□□ -1.84
COL4A5P29400 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL4A5P29400 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A5P29400 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A5P29400 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.58□□□□□ -1.84
COL4A5P29400 SNORA67.4-201ENST00000384688 142 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 AL356057.1-202ENST00000402263 756 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.58□□□□□ -1.84
COL4A5P29400 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A5P29400 AC090543.2-201ENST00000483963 348 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 RN7SL20P-201ENST00000488827 297 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL4A5P29400 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.58□□□□□ -1.84
COL4A5P29400 OR6R2P-201ENST00000609216 300 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.58□□□□□ -1.84
COL4A5P29400 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.58□□□□□ -1.84
COL4A5P29400 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 OR4G1P-202ENST00000641173 1788 ntBASIC3.58□□□□□ -1.84
COL4A5P29400 AC019072.1-201ENST00000604535 1551 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL4A5P29400 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A5P29400 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A5P29400 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A5P29400 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A5P29400 AL672167.1-206ENST00000356293 943 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL4A5P29400 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.57□□□□□ -1.84
COL4A5P29400 AC063976.3-201ENST00000426849 329 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 FDX1P2-201ENST00000450769 375 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 RPS26P24-201ENST00000497656 331 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A5P29400 NARSP2-201ENST00000518524 679 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A5P29400 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A5P29400 AC021755.1-201ENST00000559747 1447 ntBASIC3.57□□□□□ -1.84
COL4A5P29400 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL4A5P29400 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.57□□□□□ -1.84
COL4A5P29400 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
COL4A5P29400 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL4A5P29400 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A5P29400 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.56□□□□□ -1.84
COL4A5P29400 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL4A5P29400 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 AC110754.1-201ENST00000399740 601 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 AL121834.1-202ENST00000404494 277 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 AC104687.1-201ENST00000485829 412 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.56□□□□□ -1.84
COL4A5P29400 AL583832.1-201ENST00000603227 784 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A5P29400 AC108206.1-201ENST00000570186 4159 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.56□□□□□ -1.84
COL4A5P29400 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A5P29400 MTND4P26-201ENST00000415971 1359 ntBASIC3.56□□□□□ -1.84
COL4A5P29400 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
COL4A5P29400 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
COL4A5P29400 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL4A5P29400 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.55□□□□□ -1.84
COL4A5P29400 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 AC104297.1-201ENST00000393779 870 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A5P29400 MRPL50P2-201ENST00000416821 482 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms