Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC005498.1-201ENST00000592125 465 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AC006115.2-201ENST00000596823 202 ntBASIC6.51□□□□□ -1.37
RFX1P22670 MIR1302-2-201ENST00000607096 138 ntBASIC6.51□□□□□ -1.37
RFX1P22670 PART1_1.1-201ENST00000611761 217 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AC005858.4-201ENST00000623191 700 ntBASIC6.51□□□□□ -1.37
RFX1P22670 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.51□□□□□ -1.37
RFX1P22670 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.51□□□□□ -1.37
RFX1P22670 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RFX1P22670 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RFX1P22670 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX1P22670 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.5□□□□□ -1.37
RFX1P22670 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RFX1P22670 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.5□□□□□ -1.37
RFX1P22670 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFX1P22670 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RFX1P22670 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RFX1P22670 OR10R3P-201ENST00000361688 942 ntBASIC6.5□□□□□ -1.37
RFX1P22670 RN7SKP128-201ENST00000364270 303 ntBASIC6.5□□□□□ -1.37
RFX1P22670 RN7SKP292-201ENST00000365522 317 ntBASIC6.5□□□□□ -1.37
RFX1P22670 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFX1P22670 RNU6-1227P-201ENST00000383981 107 ntBASIC6.5□□□□□ -1.37
RFX1P22670 RNU6-146P-201ENST00000384602 108 ntBASIC6.5□□□□□ -1.37
RFX1P22670 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RFX1P22670 U3.25-201ENST00000391209 220 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AL122016.1-201ENST00000403365 367 ntBASIC6.5□□□□□ -1.37
RFX1P22670 SNRPEP6-201ENST00000407465 277 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AL096829.1-201ENST00000413677 457 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.5□□□□□ -1.37
RFX1P22670 AC009161.1-201ENST00000417306 376 ntBASIC6.5□□□□□ -1.37
RFX1P22670 NCOR1P3-201ENST00000420479 303 ntBASIC6.5□□□□□ -1.37
RFX1P22670 CHIAP3-201ENST00000423668 1133 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.5□□□□□ -1.37
RFX1P22670 FTH1P1-201ENST00000437933 532 ntBASIC6.5□□□□□ -1.37
RFX1P22670 RPL21P89-201ENST00000444021 467 ntBASIC6.5□□□□□ -1.37
RFX1P22670 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 AC011476.1-201ENST00000466725 307 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 AC083795.1-201ENST00000491760 320 ntBASIC6.5□□□□□ -1.37
RFX1P22670 HMGB1P21-201ENST00000502313 581 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 Y_RNA.667-201ENST00000516212 107 ntBASIC6.5□□□□□ -1.37
RFX1P22670 RNU6-941P-201ENST00000516346 108 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.5□□□□□ -1.37
RFX1P22670 MIR1273E-201ENST00000581165 102 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.5□□□□□ -1.37
RFX1P22670 AC243960.4-201ENST00000600532 288 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.5□□□□□ -1.37
RFX1P22670 YWHAQP7-201ENST00000603536 658 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC010591.1-201ENST00000603941 649 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC025588.3-201ENST00000604182 274 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.5□□□□□ -1.37
RFX1P22670 AC211433.2-201ENST00000608433 387 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC103710.2-201ENST00000609912 942 ntBASIC6.5□□□□□ -1.37
RFX1P22670 AC079684.1-201ENST00000621405 437 ntBASIC6.5□□□□□ -1.37
RFX1P22670 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX1P22670 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
RFX1P22670 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RFX1P22670 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX1P22670 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RFX1P22670 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RFX1P22670 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.5□□□□□ -1.37
RFX1P22670 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX1P22670 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.49□□□□□ -1.37
RFX1P22670 AC005224.3-201ENST00000584683 2140 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 SNORA63-201ENST00000363450 132 ntBASIC6.49□□□□□ -1.37
RFX1P22670 RNA5SP211-201ENST00000365516 117 ntBASIC6.49□□□□□ -1.37
RFX1P22670 U3.29-201ENST00000391296 212 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AL353678.1-201ENST00000422735 741 ntBASIC6.49□□□□□ -1.37
RFX1P22670 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX1P22670 AL121776.1-201ENST00000429337 372 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC005534.2-201ENST00000431047 433 ntBASIC6.49□□□□□ -1.37
RFX1P22670 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC023141.3-201ENST00000436698 278 ntBASIC6.49□□□□□ -1.37
RFX1P22670 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.49□□□□□ -1.37
RFX1P22670 KRT8P51-201ENST00000438938 274 ntBASIC6.49□□□□□ -1.37
RFX1P22670 MTND6P18-201ENST00000439477 513 ntBASIC6.49□□□□□ -1.37
RFX1P22670 RAC1P7-201ENST00000445367 377 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.49□□□□□ -1.37
RFX1P22670 AC023141.9-201ENST00000458734 412 ntBASIC6.49□□□□□ -1.37
RFX1P22670 RN7SL273P-201ENST00000481561 299 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX1P22670 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms