Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFRAP16234 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFRAP16234 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFRAP16234 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDGFRAP16234 RNA5SP399-201ENST00000364003 117 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 GSTA8P-201ENST00000404253 637 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 RPL7AP73-201ENST00000413490 353 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 RPL17P36-201ENST00000420302 549 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 TCEA1P2-201ENST00000420496 906 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 HIGD1AP4-201ENST00000430194 280 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 RPL21P89-201ENST00000444021 467 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 RPL7P59-201ENST00000447700 943 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 Z99714.1-201ENST00000450463 807 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC008837.1-201ENST00000511513 412 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 FTH1P21-201ENST00000512179 511 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AC016065.2-201ENST00000514530 444 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 snoZ278.1-201ENST00000517059 112 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFRAP16234 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 CENPUP2-201ENST00000555897 1186 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 MIR4504-201ENST00000577413 92 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AP001542.2-201ENST00000593141 364 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFRAP16234 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFRAP16234 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFRAP16234 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFRAP16234 DCAF13P1-201ENST00000495256 1330 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 AL122126.1-201ENST00000546905 1318 ntBASIC4.17□□□□□ -1.74
PDGFRAP16234 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFRAP16234 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFRAP16234 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 RNU6-298P-201ENST00000390888 96 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 TMSB4XP8-201ENST00000402089 135 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 MIR1183-201ENST00000408856 89 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 RPS7P9-201ENST00000414704 586 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 TMSB4XP6-201ENST00000415187 135 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC009237.2-201ENST00000421358 284 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFRAP16234 TMSB4XP1-201ENST00000424567 135 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AL691449.1-201ENST00000426570 421 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 RPP40P1-201ENST00000426762 456 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 TBCAP1-201ENST00000436520 327 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 PTGES3P1-201ENST00000439531 483 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.16□□□□□ -1.74
PDGFRAP16234 TVP23BP2-201ENST00000455082 615 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AP000873.1-201ENST00000463987 400 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC020898.1-201ENST00000474167 787 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC087879.1-201ENST00000474343 374 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 GAPDHP39-201ENST00000481866 979 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC068305.1-201ENST00000497406 726 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 RNU6-1028P-201ENST00000517164 93 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AP001207.1-201ENST00000524051 481 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 OR4C2P-201ENST00000530855 1064 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC090330.1-201ENST00000588646 764 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AL390816.3-201ENST00000604527 1066 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 MIR6875-201ENST00000617506 72 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC004808.1-201ENST00000627671 721 ntBASIC4.16□□□□□ -1.74
PDGFRAP16234 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.16□□□□□ -1.74
PDGFRAP16234 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PDGFRAP16234 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFRAP16234 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDGFRAP16234 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms