Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC073410.1-201ENST00000435125 589 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 LSM1P1-201ENST00000438629 273 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 PGBD4P3-201ENST00000440731 581 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 MTCO1P27-201ENST00000448269 226 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 ARPC3P5-201ENST00000448802 534 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC021660.1-201ENST00000465006 554 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC006511.1-201ENST00000470614 315 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC023598.1-201ENST00000472521 361 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC106872.3-201ENST00000495104 446 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 FTH1P8-201ENST00000498161 514 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 RNA5SP116-201ENST00000516132 98 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 BNIP3P1-201ENST00000547295 580 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC007424.1-203ENST00000554613 687 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 SULT1C2P2-201ENST00000562517 294 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC011487.3-201ENST00000593607 453 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 MIR378J-201ENST00000611988 109 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AL031658.2-201ENST00000616850 651 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC006504.8-201ENST00000621046 635 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 THAP12P4-201ENST00000528321 2266 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 OR4F13P-202ENST00000560066 2054 ntBASIC7.12□□□□□ -1.27
CSB-PGBD3P0DP91 AC107081.3-201ENST00000612715 2034 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 Y_RNA.1-201ENST00000352915 104 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 Y_RNA.72-201ENST00000362894 103 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 RNU1-85P-201ENST00000364127 164 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 SNORA51.2-201ENST00000364595 132 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 RNA5SP455-201ENST00000365190 119 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 COX6B1P1-201ENST00000415962 213 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AL035410.1-201ENST00000427409 427 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 GAPDHP17-201ENST00000449858 1001 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC140076.1-201ENST00000449897 361 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 RPS15AP17-201ENST00000470598 390 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC010486.1-201ENST00000511793 424 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AL355836.1-201ENST00000555951 870 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AL355375.2-201ENST00000574825 175 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 MIR5186-201ENST00000577504 120 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC112191.3-201ENST00000604371 277 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC087385.3-201ENST00000620477 187 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 AC007792.1-201ENST00000623023 402 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 BCORP1-203ENST00000513194 5093 ntBASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CSB-PGBD3P0DP91 TTC41P-205ENST00000551270 3963 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 Y_RNA.67-201ENST00000362870 100 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-777P-201ENST00000364265 104 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 RNU6-921P-201ENST00000384361 107 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC013442.1-201ENST00000397347 228 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 MTND3P2-201ENST00000438452 342 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 AC243772.1-201ENST00000451620 410 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 MTCO3P20-201ENST00000454926 688 ntBASIC7.1□□□□□ -1.27
CSB-PGBD3P0DP91 RPL7AP10-201ENST00000481016 791 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms