Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC020593.1-201ENST00000507399 299 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.4□□□□□ -1.54
SNRPA1P09661 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 MTCO2P32-201ENST00000514865 403 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AP002812.4-201ENST00000532139 286 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC022880.1-201ENST00000534017 973 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.4□□□□□ -1.54
SNRPA1P09661 LSM3P2-201ENST00000551246 273 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.4□□□□□ -1.54
SNRPA1P09661 SULT1C2P2-201ENST00000562517 294 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC012435.1-202ENST00000568772 240 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.4□□□□□ -1.54
SNRPA1P09661 MIR4286-201ENST00000580651 93 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AC006130.2-201ENST00000586202 326 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AL139286.2-201ENST00000606838 396 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AL353726.1-201ENST00000614041 1000 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC008083.4-201ENST00000615076 444 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.4□□□□□ -1.54
SNRPA1P09661 MIR6875-201ENST00000617506 72 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 AC015871.5-202ENST00000623252 701 ntBASIC5.4□□□□□ -1.54
SNRPA1P09661 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.4□□□□□ -1.54
SNRPA1P09661 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.4□□□□□ -1.54
SNRPA1P09661 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 SNORD65.1-201ENST00000390889 71 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 SNORA48.7-201ENST00000391302 135 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 SNORA11C-201ENST00000408532 129 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 MIR1303-201ENST00000408625 86 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 MTCO3P41-201ENST00000414801 328 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 MRPS36P1-201ENST00000421291 307 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.39□□□□□ -1.55
SNRPA1P09661 RPL23AP46-201ENST00000438548 490 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AL591363.1-201ENST00000450091 483 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC104689.1-201ENST00000473356 768 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC037198.2-201ENST00000478845 733 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 GAPDHP39-201ENST00000481866 979 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 NCOR1P1-202ENST00000486162 291 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AF213884.2-201ENST00000510417 903 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 RNA5SP360-201ENST00000516555 118 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AC092851.1-201ENST00000535964 478 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.39□□□□□ -1.55
SNRPA1P09661 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.39□□□□□ -1.55
SNRPA1P09661 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AGGF1P4-201ENST00000568249 801 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC022655.2-201ENST00000577280 318 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC053481.4-201ENST00000583164 216 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 EIF1P6-201ENST00000600054 334 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AL137072.1-201ENST00000603444 466 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 MIR7151-201ENST00000617477 60 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AL359715.5-201ENST00000623431 443 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC019278.1-201ENST00000623516 479 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC145207.9-201ENST00000623802 325 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AP003072.4-201ENST00000624580 310 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC092184.1-201ENST00000625042 715 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 AL392088.2-201ENST00000637607 285 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.39□□□□□ -1.55
SNRPA1P09661 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.39□□□□□ -1.55
SNRPA1P09661 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 AC005539.1-201ENST00000443768 1479 ntBASIC5.39□□□□□ -1.55
SNRPA1P09661 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNRPA1P09661 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNRPA1P09661 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC015813.6-201ENST00000624409 5808 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 OR11H4-201ENST00000315409 1082 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 SNORA62.2-201ENST00000364672 152 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SNRPA1P09661 OR5H15-201ENST00000383696 930 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 SNORD96B-201ENST00000386148 79 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 MT-TH-201ENST00000387441 69 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 RNU6-920P-201ENST00000410926 92 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 CEACAMP8-201ENST00000413902 580 ntBASIC5.38□□□□□ -1.55
SNRPA1P09661 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.38□□□□□ -1.55
SNRPA1P09661 AC114814.2-201ENST00000419195 485 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms