Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CXCL1P09341 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL1P09341 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.55□□□□□ -2
CXCL1P09341 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.55□□□□□ -2
CXCL1P09341 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL1P09341 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 RNU6-618P-201ENST00000363518 112 ntBASIC2.55□□□□□ -2
CXCL1P09341 SNORA7.2-201ENST00000364446 145 ntBASIC2.55□□□□□ -2
CXCL1P09341 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL1P09341 RSL24D1P1-201ENST00000404972 493 ntBASIC2.55□□□□□ -2
CXCL1P09341 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 BTF3P9-201ENST00000418784 283 ntBASIC2.55□□□□□ -2
CXCL1P09341 AC012065.2-201ENST00000421295 375 ntBASIC2.55□□□□□ -2
CXCL1P09341 AC073143.1-201ENST00000436316 395 ntBASIC2.55□□□□□ -2
CXCL1P09341 HMGB1P12-201ENST00000438594 598 ntBASIC2.55□□□□□ -2
CXCL1P09341 AL662791.1-201ENST00000441992 928 ntBASIC2.55□□□□□ -2
CXCL1P09341 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
CXCL1P09341 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 RPS29P33-201ENST00000456717 146 ntBASIC2.55□□□□□ -2
CXCL1P09341 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 AP004217.1-201ENST00000480579 346 ntBASIC2.55□□□□□ -2
CXCL1P09341 RPS4XP13-201ENST00000483219 789 ntBASIC2.55□□□□□ -2
CXCL1P09341 AC093267.1-201ENST00000489176 961 ntBASIC2.55□□□□□ -2
CXCL1P09341 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.55□□□□□ -2
CXCL1P09341 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 TMEM248P1-201ENST00000510579 951 ntBASIC2.55□□□□□ -2
CXCL1P09341 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.55□□□□□ -2
CXCL1P09341 IGKV2D-10-201ENST00000520194 281 ntBASIC2.55□□□□□ -2
CXCL1P09341 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.55□□□□□ -2
CXCL1P09341 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.55□□□□□ -2
CXCL1P09341 OR8L1P-201ENST00000534005 955 ntBASIC2.55□□□□□ -2
CXCL1P09341 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.55□□□□□ -2
CXCL1P09341 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 OR6C73P-201ENST00000546432 358 ntBASIC2.55□□□□□ -2
CXCL1P09341 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
CXCL1P09341 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.55□□□□□ -2
CXCL1P09341 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.55□□□□□ -2
CXCL1P09341 MTND4LP24-201ENST00000572277 291 ntBASIC2.55□□□□□ -2
CXCL1P09341 AC005951.1-201ENST00000576706 485 ntBASIC2.55□□□□□ -2
CXCL1P09341 MIR3690-201ENST00000580266 75 ntBASIC2.55□□□□□ -2
CXCL1P09341 AL359715.4-201ENST00000606629 1436 ntBASIC2.55□□□□□ -2
CXCL1P09341 AL591516.1-201ENST00000611326 274 ntBASIC2.55□□□□□ -2
CXCL1P09341 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
CXCL1P09341 AC011472.4-201ENST00000615848 491 ntBASIC2.55□□□□□ -2
CXCL1P09341 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CXCL1P09341 SNORD39.4-201ENST00000620099 78 ntBASIC2.55□□□□□ -2
CXCL1P09341 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.55□□□□□ -2
CXCL1P09341 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.55□□□□□ -2
CXCL1P09341 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.54□□□□□ -2
CXCL1P09341 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 API5P2-201ENST00000397055 1498 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC108206.1-201ENST00000570186 4159 ntBASIC2.54□□□□□ -2
CXCL1P09341 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CXCL1P09341 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
CXCL1P09341 AL357075.1-201ENST00000404107 726 ntBASIC2.54□□□□□ -2
CXCL1P09341 RNA5SP317-201ENST00000410176 116 ntBASIC2.54□□□□□ -2
CXCL1P09341 RNA5SP311-201ENST00000411290 116 ntBASIC2.54□□□□□ -2
CXCL1P09341 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 SAR1AP4-201ENST00000429225 591 ntBASIC2.54□□□□□ -2
CXCL1P09341 CST9LP2-201ENST00000437612 320 ntBASIC2.54□□□□□ -2
CXCL1P09341 RPL21P89-201ENST00000444021 467 ntBASIC2.54□□□□□ -2
CXCL1P09341 RPL39P40-201ENST00000445481 146 ntBASIC2.54□□□□□ -2
CXCL1P09341 HSFY6P-201ENST00000445573 403 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 AC114755.5-201ENST00000447760 831 ntBASIC2.54□□□□□ -2
CXCL1P09341 Z99127.3-201ENST00000448158 395 ntBASIC2.54□□□□□ -2
CXCL1P09341 BUD31P2-201ENST00000449374 300 ntBASIC2.54□□□□□ -2
CXCL1P09341 SLC31A1P1-201ENST00000451221 567 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 HMGN2P16-201ENST00000456802 261 ntBASIC2.54□□□□□ -2
CXCL1P09341 SNORD105B-201ENST00000458770 79 ntBASIC2.54□□□□□ -2
CXCL1P09341 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 AC010460.1-201ENST00000507087 466 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 AC108064.1-201ENST00000513791 460 ntBASIC2.54□□□□□ -2
CXCL1P09341 RNA5SP315-201ENST00000516340 116 ntBASIC2.54□□□□□ -2
CXCL1P09341 RNA5SP312-201ENST00000517068 116 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.54□□□□□ -2
CXCL1P09341 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.54□□□□□ -2
CXCL1P09341 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.54□□□□□ -2
CXCL1P09341 FAM60CP-201ENST00000591086 664 ntBASIC2.54□□□□□ -2
CXCL1P09341 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 AC006557.5-201ENST00000603126 811 ntBASIC2.54□□□□□ -2
CXCL1P09341 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.54□□□□□ -2
CXCL1P09341 AL354798.1-201ENST00000622505 329 ntBASIC2.54□□□□□ -2
CXCL1P09341 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.54□□□□□ -2
CXCL1P09341 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms