Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 CDC27P1-201ENST00000445384 715 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL031584.1-201ENST00000447169 754 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC109486.1-201ENST00000486833 374 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 DYNLL1P6-201ENST00000503440 264 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 RNA5SP446-201ENST00000515955 82 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 OR5G4P-201ENST00000525251 760 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC245505.1-201ENST00000556398 224 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 BNIP3P5-201ENST00000562290 498 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC074051.3-201ENST00000570238 358 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC055764.2-201ENST00000610089 670 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AC013476.2-201ENST00000614456 459 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 AL021997.2-201ENST00000615674 271 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 MIR8059-201ENST00000620427 81 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HLA-DOAP06340 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
HLA-DOAP06340 LARP1BP1-201ENST00000506036 1359 ntBASIC5.16□□□□□ -1.58
HLA-DOAP06340 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DOAP06340 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
HLA-DOAP06340 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DOAP06340 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DOAP06340 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
HLA-DOAP06340 AC005539.1-201ENST00000443768 1479 ntBASIC5.15□□□□□ -1.58
HLA-DOAP06340 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-DOAP06340 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HLA-DOAP06340 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.15□□□□□ -1.58
HLA-DOAP06340 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 RNA5SP307-201ENST00000362863 116 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 SNORA57.1-201ENST00000391227 145 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL022722.2-201ENST00000402519 180 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 ZNF603P-201ENST00000405613 487 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 SNORA74C-2-201ENST00000411179 201 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 RPL6P29-201ENST00000414863 865 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC104306.1-201ENST00000449702 371 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 RPL5P32-201ENST00000454085 879 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 RFC5P1-201ENST00000454419 874 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DOAP06340 CFTRP1-201ENST00000456646 183 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 RPL35AP15-201ENST00000468042 339 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 RPL9P33-201ENST00000484311 566 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 RN7SL691P-201ENST00000494487 301 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 RPS4XP18-201ENST00000495480 763 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DOAP06340 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC109445.1-201ENST00000512356 383 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 RNA5SP49-201ENST00000516450 115 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC016957.1-201ENST00000534895 309 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC005832.3-201ENST00000537929 631 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 CCNG2P1-201ENST00000549521 1000 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 MIR4666A-201ENST00000580160 79 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 EIF1P6-201ENST00000600054 334 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC067959.1-201ENST00000604334 379 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AP002360.3-201ENST00000607673 710 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL136981.2-201ENST00000617319 734 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC007546.2-201ENST00000623996 360 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.15□□□□□ -1.59
HLA-DOAP06340 MIR492-201ENST00000638676 116 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 AL672167.1-205ENST00000641112 3080 ntBASIC5.15□□□□□ -1.59
HLA-DOAP06340 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms