Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AP001207.2-201ENST00000519490 539 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 MIR4458-201ENST00000578872 75 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AL606834.2-201ENST00000602954 668 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC084373.1-201ENST00000603311 235 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 C2orf27A-204ENST00000623058 969 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC240504.1-201ENST00000395709 845 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AL158156.1-201ENST00000422509 473 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AL591503.2-201ENST00000442314 1005 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC069540.1-201ENST00000446320 988 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC087385.1-201ENST00000475062 312 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 AC011492.1-201ENST00000600023 315 ntBASIC3.24□□□□□ -1.89
HLA-DQB2P05538 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DQB2P05538 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC066616.2-201ENST00000559334 1481 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC090229.1-201ENST00000590983 1609 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 RNU6-1251P-201ENST00000364502 107 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 U3.15-201ENST00000365398 212 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 TAF9BP1-201ENST00000396646 746 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 RNA5SP120-201ENST00000410900 112 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC009237.5-201ENST00000414271 501 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC245291.1-201ENST00000419501 328 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC006960.1-201ENST00000419980 153 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 GTF2IP23-201ENST00000423746 351 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 RPL7P48-201ENST00000461513 746 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 RPL7P49-201ENST00000471402 708 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC007537.2-201ENST00000472093 511 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC024341.1-201ENST00000526444 1552 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC006518.1-201ENST00000541449 943 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 FAM60CP-201ENST00000591086 664 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AC015849.2-201ENST00000605738 409 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 AL353746.1-201ENST00000566293 6881 ntBASIC3.23□□□□□ -1.89
HLA-DQB2P05538 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DQB2P05538 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 RPL31P52-201ENST00000407532 367 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 MTCYBP29-201ENST00000436327 1006 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC021205.1-201ENST00000468797 348 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC011037.1-201ENST00000483964 558 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AL358832.1-201ENST00000497800 389 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQB2P05538 AC010285.3-201ENST00000511668 676 ntBASIC3.22□□□□□ -1.89
HLA-DQB2P05538 CCNHP1-201ENST00000513311 678 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms