Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 AC234772.3-201ENST00000602277 528 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 MTATP6P2-201ENST00000603319 678 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.12□□□□□ -1.75
COL2A1P02458 AC233280.2-201ENST00000603917 1070 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AC087468.1-201ENST00000604365 630 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 SNORA35B-201ENST00000607417 129 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AL355802.4-201ENST00000607635 548 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
COL2A1P02458 AL163051.2-201ENST00000618976 735 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 AP002791.1-201ENST00000623291 381 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
COL2A1P02458 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.12□□□□□ -1.75
COL2A1P02458 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
COL2A1P02458 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 NMD3P1-201ENST00000439704 1488 ntBASIC4.12□□□□□ -1.75
COL2A1P02458 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.12□□□□□ -1.75
COL2A1P02458 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL2A1P02458 OR10J6P-201ENST00000289731 930 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL2A1P02458 RNU6-819P-201ENST00000364116 107 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 MTND4LP20-201ENST00000402379 270 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 AC073464.3-201ENST00000422564 712 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AL121882.1-201ENST00000422893 417 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 UBE2D3P3-201ENST00000426992 425 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 IFNNP1-201ENST00000429219 553 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 USP9YP14-201ENST00000430663 563 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 MTCO2P3-201ENST00000442543 421 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.11□□□□□ -1.75
COL2A1P02458 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 RSL24D1P3-201ENST00000449255 495 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 HMGN1P8-201ENST00000463578 288 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 VTA1P2-201ENST00000520205 911 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
COL2A1P02458 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.11□□□□□ -1.75
COL2A1P02458 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC092111.2-201ENST00000611627 1414 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC009237.17-201ENST00000618111 748 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC074276.2-201ENST00000619891 348 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AP000943.4-201ENST00000622912 357 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC017104.5-201ENST00000637647 639 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.11□□□□□ -1.75
COL2A1P02458 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 MTND4P4-201ENST00000439033 1366 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL2A1P02458 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 AL132656.3-201ENST00000606384 1595 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
COL2A1P02458 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL2A1P02458 RPL23AP57-201ENST00000332361 466 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 HMGN2P8-201ENST00000391458 268 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 RPL22P22-201ENST00000395439 379 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AL139095.1-201ENST00000404326 391 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 BX119904.4-201ENST00000424402 301 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 RPP40P1-201ENST00000426762 456 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 RPS20P1-201ENST00000434853 354 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 MTND4P32-201ENST00000437189 1237 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AF228730.2-201ENST00000438784 848 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 ART2BP-201ENST00000453501 499 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 BTF3P5-201ENST00000457252 467 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 snoU109.3-201ENST00000459477 145 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 SEPT7P6-201ENST00000469999 1143 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 FCF1P8-201ENST00000510322 597 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.11□□□□□ -1.75
COL2A1P02458 AC008088.1-201ENST00000580993 280 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC125494.3-201ENST00000602759 455 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC080013.3-201ENST00000606839 578 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
COL2A1P02458 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL2A1P02458 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms