Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC117440.1-201ENST00000474107 571 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 VWA8P1-201ENST00000510889 176 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 RN7SKP60-201ENST00000516985 239 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.76□□□□□ -1.81
COL1A1P02452 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.76□□□□□ -1.81
COL1A1P02452 AC104763.2-201ENST00000604179 382 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 AC068722.2-201ENST00000618734 544 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 AL137790.1-201ENST00000634283 177 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 AL645568.2-201ENST00000432815 1337 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL1A1P02452 AC026523.2-201ENST00000625039 7739 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 MTND4P10-201ENST00000446199 1363 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.76□□□□□ -1.81
COL1A1P02452 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL1A1P02452 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
COL1A1P02452 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL1A1P02452 ZNF90P1-201ENST00000480493 1951 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
COL1A1P02452 SNORA71.1-201ENST00000364523 117 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 AMD1P2-201ENST00000412936 992 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.75□□□□□ -1.81
COL1A1P02452 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 OR2A20P-203ENST00000498397 1268 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.75□□□□□ -1.81
COL1A1P02452 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.75□□□□□ -1.81
COL1A1P02452 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.75□□□□□ -1.81
COL1A1P02452 AC008507.1-201ENST00000587506 734 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 AC007998.5-201ENST00000622938 237 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 AC099506.2-201ENST00000623074 221 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL1A1P02452 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL1A1P02452 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
COL1A1P02452 AC090971.4-201ENST00000560291 1800 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
COL1A1P02452 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL1A1P02452 AC000403.1-201ENST00000613696 3585 ntBASIC3.75□□□□□ -1.81
COL1A1P02452 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
COL1A1P02452 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 AC012020.1-201ENST00000624541 1728 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.74□□□□□ -1.81
COL1A1P02452 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
COL1A1P02452 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.74□□□□□ -1.81
COL1A1P02452 AC108734.1-201ENST00000439549 399 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 RPS12P18-201ENST00000442381 270 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.74□□□□□ -1.81
COL1A1P02452 VN1R104P-201ENST00000505115 1009 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.74□□□□□ -1.81
COL1A1P02452 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.74□□□□□ -1.81
COL1A1P02452 AL592295.2-201ENST00000612578 206 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL1A1P02452 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
COL1A1P02452 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
COL1A1P02452 NR1H5P-201ENST00000452683 1377 ntBASIC3.74□□□□□ -1.81
COL1A1P02452 FTLP6-201ENST00000355274 422 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 RN7SKP220-201ENST00000410611 288 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.73□□□□□ -1.81
COL1A1P02452 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.73□□□□□ -1.81
COL1A1P02452 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.73□□□□□ -1.81
COL1A1P02452 Y_RNA.638-201ENST00000459374 113 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AP001207.2-201ENST00000519490 539 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AL157394.1-201ENST00000562983 1224 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.73□□□□□ -1.81
COL1A1P02452 AC025946.2-201ENST00000603398 234 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC009948.4-201ENST00000604692 675 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC091903.1-201ENST00000624322 454 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.73□□□□□ -1.81
COL1A1P02452 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
COL1A1P02452 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.73□□□□□ -1.81
COL1A1P02452 AL353692.2-201ENST00000407054 335 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 RANP7-201ENST00000418085 644 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 ISCA1P2-201ENST00000438679 421 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC000041.1-201ENST00000439655 175 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.73□□□□□ -1.81
COL1A1P02452 RPL31P50-201ENST00000471002 296 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
COL1A1P02452 AC026801.2-201ENST00000515352 425 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AC009812.2-201ENST00000517657 457 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 AC018552.3-201ENST00000567416 561 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL1A1P02452 OR2AS2P-201ENST00000606902 342 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 CYCSP41-201ENST00000616920 296 ntBASIC3.73□□□□□ -1.81
COL1A1P02452 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL1A1P02452 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.72□□□□□ -1.81
COL1A1P02452 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms