Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 SNORD56.4-201ENST00000363883 71 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 PTMAP2-201ENST00000397627 327 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AL138878.1-201ENST00000405131 347 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 RN7SKP159-201ENST00000410657 292 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE4BO95155 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 RPS15AP40-201ENST00000419621 391 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE4BO95155 NDUFB1P1-201ENST00000435191 180 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AL590762.3-201ENST00000436372 640 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 SKP1P1-201ENST00000438081 489 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC009263.1-201ENST00000441193 1239 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 RPL23AP15-201ENST00000450202 459 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 DNAJC19P8-201ENST00000452887 259 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC008280.2-201ENST00000455473 307 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 SNORD108-201ENST00000459332 71 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 RPL21P47-201ENST00000483696 477 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC112518.2-201ENST00000508565 425 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC027338.1-201ENST00000514840 825 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC007991.1-201ENST00000522680 631 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.05□□□□□ -1.76
UBE4BO95155 CENPUP2-201ENST00000555897 1186 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC107982.3-201ENST00000584957 985 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.05□□□□□ -1.76
UBE4BO95155 AC008739.3-201ENST00000603262 127 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC091488.1-201ENST00000604239 660 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC244100.1-202ENST00000621554 382 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC097460.3-201ENST00000623099 442 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AL356094.1-201ENST00000624663 1212 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 AC092608.3-201ENST00000625017 386 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 MIR4496-201ENST00000635896 61 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 FAM157B-203ENST00000639350 358 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
UBE4BO95155 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.05□□□□□ -1.76
UBE4BO95155 USP8P1-201ENST00000494673 3183 ntBASIC4.05□□□□□ -1.76
UBE4BO95155 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBE4BO95155 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
UBE4BO95155 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE4BO95155 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE4BO95155 MTHFD2P2-201ENST00000407725 247 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 CRYBB2P1-203ENST00000415709 538 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AL158050.1-201ENST00000416077 457 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.04□□□□□ -1.76
UBE4BO95155 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 AC233982.1-201ENST00000451247 436 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 AC126121.1-201ENST00000482313 553 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
UBE4BO95155 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 AP003717.3-201ENST00000544832 1180 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 TRAV15-201ENST00000556680 249 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AC004825.2-201ENST00000616634 455 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AL732618.1-201ENST00000623251 301 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 OR6C71P-202ENST00000641886 1107 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE4BO95155 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.04□□□□□ -1.76
UBE4BO95155 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.04□□□□□ -1.76
UBE4BO95155 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
UBE4BO95155 CR381670.1-201ENST00000624291 1693 ntBASIC4.04□□□□□ -1.76
UBE4BO95155 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.76
UBE4BO95155 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UBE4BO95155 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms