Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-1225P-201ENST00000516336 65 ntBASIC3.92□□□□□ -1.78
PRKNO60260 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.92□□□□□ -1.78
PRKNO60260 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.92□□□□□ -1.78
PRKNO60260 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.92□□□□□ -1.78
PRKNO60260 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.92□□□□□ -1.78
PRKNO60260 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.92□□□□□ -1.78
PRKNO60260 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.92□□□□□ -1.78
PRKNO60260 PSMA6P4-201ENST00000603247 718 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC233280.2-201ENST00000603917 1070 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL022161.1-201ENST00000604390 213 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC106791.2-201ENST00000604680 391 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AL355816.1-201ENST00000607951 118 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.92□□□□□ -1.78
PRKNO60260 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.92□□□□□ -1.78
PRKNO60260 MIR8059-201ENST00000620427 81 ntBASIC3.92□□□□□ -1.78
PRKNO60260 AC124312.6-202ENST00000623624 418 ntBASIC3.92□□□□□ -1.78
PRKNO60260 CR392039.4-201ENST00000624968 501 ntBASIC3.92□□□□□ -1.78
PRKNO60260 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
PRKNO60260 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.92□□□□□ -1.78
PRKNO60260 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.92□□□□□ -1.78
PRKNO60260 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRKNO60260 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 AP000526.1-201ENST00000603308 1388 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL353743.4-201ENST00000422653 1547 ntBASIC3.91□□□□□ -1.78
PRKNO60260 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 AC006971.1-201ENST00000407916 4486 ntBASIC3.91□□□□□ -1.78
PRKNO60260 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 AL512646.1-201ENST00000269395 1077 ntBASIC3.91□□□□□ -1.78
PRKNO60260 RNU1-15P-201ENST00000353977 144 ntBASIC3.91□□□□□ -1.78
PRKNO60260 RNU6-582P-201ENST00000362989 107 ntBASIC3.91□□□□□ -1.78
PRKNO60260 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 SNORD116-1-201ENST00000384335 95 ntBASIC3.91□□□□□ -1.78
PRKNO60260 SNORA70C-201ENST00000384538 135 ntBASIC3.91□□□□□ -1.78
PRKNO60260 RNU6-1300P-201ENST00000391046 108 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL590084.2-201ENST00000401481 382 ntBASIC3.91□□□□□ -1.78
PRKNO60260 TMSB4XP8-201ENST00000402089 135 ntBASIC3.91□□□□□ -1.78
PRKNO60260 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 AL133264.1-201ENST00000407157 562 ntBASIC3.91□□□□□ -1.78
PRKNO60260 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 RN7SKP182-201ENST00000410772 298 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL049737.1-201ENST00000413920 1403 ntBASIC3.91□□□□□ -1.78
PRKNO60260 TMSB4XP6-201ENST00000415187 135 ntBASIC3.91□□□□□ -1.78
PRKNO60260 CYP1D1P-201ENST00000416662 1433 ntBASIC3.91□□□□□ -1.78
PRKNO60260 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC004448.2-201ENST00000422360 586 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL365203.2-201ENST00000423444 196 ntBASIC3.91□□□□□ -1.78
PRKNO60260 TMSB4XP1-201ENST00000424567 135 ntBASIC3.91□□□□□ -1.78
PRKNO60260 COX6CP15-201ENST00000426313 211 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC073335.1-201ENST00000427776 363 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC005345.1-201ENST00000431868 217 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.91□□□□□ -1.78
PRKNO60260 RPS26P40-201ENST00000435209 294 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 YWHAZP7-201ENST00000436906 631 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL445567.1-201ENST00000439121 144 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 MTCO2P25-201ENST00000447065 681 ntBASIC3.91□□□□□ -1.78
PRKNO60260 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC005008.1-201ENST00000456151 612 ntBASIC3.91□□□□□ -1.78
PRKNO60260 RPL5P24-201ENST00000463742 885 ntBASIC3.91□□□□□ -1.78
PRKNO60260 MTND1P16-201ENST00000465177 898 ntBASIC3.91□□□□□ -1.78
PRKNO60260 FTH1P2-201ENST00000466086 412 ntBASIC3.91□□□□□ -1.78
PRKNO60260 CCDC75P1-201ENST00000469247 791 ntBASIC3.91□□□□□ -1.78
PRKNO60260 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 AC079395.1-201ENST00000510981 262 ntBASIC3.91□□□□□ -1.78
PRKNO60260 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 AC099522.1-202ENST00000514718 367 ntBASIC3.91□□□□□ -1.78
PRKNO60260 RNA5SP135-201ENST00000517019 125 ntBASIC3.91□□□□□ -1.78
PRKNO60260 HIGD1AP6-201ENST00000521833 279 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AF279873.1-201ENST00000523393 313 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC100770.1-201ENST00000532310 322 ntBASIC3.91□□□□□ -1.78
PRKNO60260 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 DYNLL1P4-201ENST00000549314 266 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.91□□□□□ -1.78
PRKNO60260 AC008759.1-201ENST00000589783 983 ntBASIC3.91□□□□□ -1.78
PRKNO60260 VN1R82P-201ENST00000601481 356 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AC015726.1-201ENST00000602353 681 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL591034.3-201ENST00000605511 685 ntBASIC3.91□□□□□ -1.78
PRKNO60260 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 LINC00901.1-201ENST00000617252 152 ntBASIC3.91□□□□□ -1.78
PRKNO60260 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.91□□□□□ -1.78
PRKNO60260 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRKNO60260 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms