Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC011978.2-201ENST00000569835 2054 ntBASIC3.21□□□□□ -1.9
SGCEO43556 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SGCEO43556 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SGCEO43556 NSRP1P1-201ENST00000444067 1693 ntBASIC3.2□□□□□ -1.9
SGCEO43556 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SGCEO43556 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SGCEO43556 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SGCEO43556 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
SGCEO43556 RNA5SP515-201ENST00000364570 118 ntBASIC3.2□□□□□ -1.9
SGCEO43556 SNORA51.2-201ENST00000364595 132 ntBASIC3.2□□□□□ -1.9
SGCEO43556 MTATP6P31-201ENST00000406985 692 ntBASIC3.2□□□□□ -1.9
SGCEO43556 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 OR51AB1P-201ENST00000429046 620 ntBASIC3.2□□□□□ -1.9
SGCEO43556 RPL37P1-201ENST00000432310 284 ntBASIC3.2□□□□□ -1.9
SGCEO43556 MRPS18BP2-201ENST00000434310 759 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 HMGB1P48-201ENST00000446155 598 ntBASIC3.2□□□□□ -1.9
SGCEO43556 MORF4L1P4-201ENST00000450245 976 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 RPS4XP13-201ENST00000483219 789 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 HMGB3P15-201ENST00000507326 574 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 TXNP6-201ENST00000510190 310 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AC004923.2-201ENST00000529649 369 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SGCEO43556 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.2□□□□□ -1.9
SGCEO43556 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.2□□□□□ -1.9
SGCEO43556 MTCO3P22-201ENST00000603219 784 ntBASIC3.2□□□□□ -1.9
SGCEO43556 AL732618.1-201ENST00000623251 301 ntBASIC3.2□□□□□ -1.9
SGCEO43556 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.2□□□□□ -1.9
SGCEO43556 AL732372.2-225ENST00000642124 456 ntBASIC3.2□□□□□ -1.9
SGCEO43556 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SGCEO43556 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.2□□□□□ -1.9
SGCEO43556 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.19□□□□□ -1.9
SGCEO43556 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SGCEO43556 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
SGCEO43556 SNORA57.1-201ENST00000391227 145 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.19□□□□□ -1.9
SGCEO43556 AL391417.1-201ENST00000404100 426 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.19□□□□□ -1.9
SGCEO43556 XKRYP4-201ENST00000414395 483 ntBASIC3.19□□□□□ -1.9
SGCEO43556 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 AC244098.2-201ENST00000422068 99 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC006989.1-201ENST00000427212 131 ntBASIC3.19□□□□□ -1.9
SGCEO43556 MTCO1P43-201ENST00000431831 488 ntBASIC3.19□□□□□ -1.9
SGCEO43556 HMGB1P12-201ENST00000438594 598 ntBASIC3.19□□□□□ -1.9
SGCEO43556 XKRYP5-201ENST00000449659 483 ntBASIC3.19□□□□□ -1.9
SGCEO43556 PTGES3P5-201ENST00000455109 434 ntBASIC3.19□□□□□ -1.9
SGCEO43556 U3.44-201ENST00000458938 192 ntBASIC3.19□□□□□ -1.9
SGCEO43556 snoU13.7-201ENST00000459220 104 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC092754.2-201ENST00000463506 460 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.19□□□□□ -1.9
SGCEO43556 AC104689.1-201ENST00000473356 768 ntBASIC3.19□□□□□ -1.9
SGCEO43556 NPM1P17-201ENST00000479221 602 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC093267.1-201ENST00000489176 961 ntBASIC3.19□□□□□ -1.9
SGCEO43556 RPL23AP73-201ENST00000492507 471 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC026402.1-201ENST00000513642 170 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 OR4R3P-201ENST00000525084 838 ntBASIC3.19□□□□□ -1.9
SGCEO43556 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SGCEO43556 AC084824.1-201ENST00000550917 1005 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.19□□□□□ -1.9
SGCEO43556 SUMO2P14-201ENST00000604488 293 ntBASIC3.19□□□□□ -1.9
SGCEO43556 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 RNU1-30P-201ENST00000606575 163 ntBASIC3.19□□□□□ -1.9
SGCEO43556 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.19□□□□□ -1.9
SGCEO43556 AC092184.1-201ENST00000625042 715 ntBASIC3.19□□□□□ -1.9
SGCEO43556 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.19□□□□□ -1.9
SGCEO43556 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SGCEO43556 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SGCEO43556 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.19□□□□□ -1.9
SGCEO43556 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
SGCEO43556 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SGCEO43556 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SGCEO43556 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms