Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RNU7-27P-201ENST00000459281 62 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC091167.1-201ENST00000492017 396 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC092045.1-201ENST00000495716 1231 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC021146.8-201ENST00000507455 733 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.42□□□□□ -1.7
SMAD6O43541 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 AC006362.1-201ENST00000567392 174 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC073544.2-201ENST00000601155 540 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AF131215.7-201ENST00000602443 707 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 OR2BH1P-201ENST00000608850 864 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC004223.4-201ENST00000612426 332 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AL139418.1-201ENST00000613613 177 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC123768.4-201ENST00000616244 701 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SMAD6O43541 AC105074.1-201ENST00000623380 3095 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 ZNF663P-202ENST00000641770 1131 ntBASIC4.42□□□□□ -1.7
SMAD6O43541 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.42□□□□□ -1.7
SMAD6O43541 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SMAD6O43541 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.42□□□□□ -1.7
SMAD6O43541 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 MAPK10-303ENST00000641324 3959 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMAD6O43541 SNORA70.2-201ENST00000364506 135 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 RNA5SP366-201ENST00000365454 123 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 Y_RNA.553-201ENST00000384670 102 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 Y_RNA.560-201ENST00000384689 102 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 SNORA74C-2-201ENST00000411179 201 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC010385.1-201ENST00000412374 256 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 RPL23AP26-201ENST00000412728 464 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 VDAC1P9-201ENST00000412766 841 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 NPM1P11-201ENST00000417106 855 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 RPL30P16-201ENST00000419341 429 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 RPS6P12-201ENST00000432491 726 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 MTATP6P13-201ENST00000438531 667 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 RPS24P1-201ENST00000438550 371 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.41□□□□□ -1.7
SMAD6O43541 MTCYBP34-201ENST00000439552 670 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 ACTR3P2-201ENST00000439585 1257 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 MTATP6P23-201ENST00000440153 476 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AL592437.1-201ENST00000443781 492 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 MTCYBP3-201ENST00000445588 1137 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 HMGB1P48-201ENST00000446155 598 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 NUTF2P3-201ENST00000448540 384 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 RPS20P4-201ENST00000461659 355 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 RPL7P22-201ENST00000466005 733 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC090013.1-201ENST00000485147 480 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC107398.1-201ENST00000486904 505 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.41□□□□□ -1.7
SMAD6O43541 RN7SL691P-201ENST00000494487 301 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC108043.1-201ENST00000512696 574 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 Y_RNA.695-201ENST00000516715 107 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 NDUFA5P2-201ENST00000519723 344 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
SMAD6O43541 PARP1P2-201ENST00000556806 195 ntBASIC4.41□□□□□ -1.7
SMAD6O43541 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms