Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.51□□□□□ -1.69
MSI1O43347 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
MSI1O43347 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.51□□□□□ -1.69
MSI1O43347 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
MSI1O43347 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSI1O43347 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.51□□□□□ -1.69
MSI1O43347 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.51□□□□□ -1.69
MSI1O43347 NBR2-204ENST00000587322 63 ntBASIC4.51□□□□□ -1.69
MSI1O43347 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.51□□□□□ -1.69
MSI1O43347 AL020997.2-201ENST00000602607 184 ntBASIC4.51□□□□□ -1.69
MSI1O43347 AL021997.2-201ENST00000615674 271 ntBASIC4.51□□□□□ -1.69
MSI1O43347 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.51□□□□□ -1.69
MSI1O43347 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
MSI1O43347 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.51□□□□□ -1.69
MSI1O43347 AC055839.1-201ENST00000634467 498 ntBASIC4.51□□□□□ -1.69
MSI1O43347 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.51□□□□□ -1.69
MSI1O43347 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSI1O43347 AL445523.1-201ENST00000451184 1362 ntBASIC4.51□□□□□ -1.69
MSI1O43347 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.51□□□□□ -1.69
MSI1O43347 AC134882.1-201ENST00000603738 1676 ntBASIC4.51□□□□□ -1.69
MSI1O43347 AC010329.2-201ENST00000595195 2737 ntBASIC4.51□□□□□ -1.69
MSI1O43347 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.5□□□□□ -1.69
MSI1O43347 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 RNU1-20P-201ENST00000363314 162 ntBASIC4.5□□□□□ -1.69
MSI1O43347 RNU6-1066P-201ENST00000363573 105 ntBASIC4.5□□□□□ -1.69
MSI1O43347 TMSB4XP8-201ENST00000402089 135 ntBASIC4.5□□□□□ -1.69
MSI1O43347 LAP3P1-201ENST00000403648 294 ntBASIC4.5□□□□□ -1.69
MSI1O43347 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 RPL23AP26-201ENST00000412728 464 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AL136133.1-201ENST00000413694 376 ntBASIC4.5□□□□□ -1.69
MSI1O43347 TMSB4XP6-201ENST00000415187 135 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AC019178.2-201ENST00000423595 505 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AL022400.1-201ENST00000423946 935 ntBASIC4.5□□□□□ -1.69
MSI1O43347 TMSB4XP1-201ENST00000424567 135 ntBASIC4.5□□□□□ -1.69
MSI1O43347 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 SKP1P3-201ENST00000429280 487 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.5□□□□□ -1.69
MSI1O43347 ELOCP10-201ENST00000440624 327 ntBASIC4.5□□□□□ -1.69
MSI1O43347 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 RPL21P71-201ENST00000465598 459 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC010618.1-201ENST00000469924 477 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC108022.1-201ENST00000493466 478 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.5□□□□□ -1.69
MSI1O43347 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AP001207.1-201ENST00000524051 481 ntBASIC4.5□□□□□ -1.69
MSI1O43347 CYCSP29-201ENST00000533731 318 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AL352979.3-201ENST00000553515 247 ntBASIC4.5□□□□□ -1.69
MSI1O43347 ATP5J2P6-201ENST00000565203 266 ntBASIC4.5□□□□□ -1.69
MSI1O43347 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.5□□□□□ -1.69
MSI1O43347 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.5□□□□□ -1.69
MSI1O43347 RPL23AP97-201ENST00000568955 471 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.5□□□□□ -1.69
MSI1O43347 AC138915.2-201ENST00000569776 97 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC011477.5-201ENST00000586571 259 ntBASIC4.5□□□□□ -1.69
MSI1O43347 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 AC008687.2-201ENST00000597865 520 ntBASIC4.5□□□□□ -1.69
MSI1O43347 PSMA6P4-201ENST00000603247 718 ntBASIC4.5□□□□□ -1.69
MSI1O43347 ELOCP34-201ENST00000604436 327 ntBASIC4.5□□□□□ -1.69
MSI1O43347 AC018714.1-201ENST00000605028 208 ntBASIC4.5□□□□□ -1.69
MSI1O43347 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 AC243756.2-201ENST00000618406 463 ntBASIC4.5□□□□□ -1.69
MSI1O43347 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 MKKS-204ENST00000639674 192 ntBASIC4.5□□□□□ -1.69
MSI1O43347 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
MSI1O43347 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
MSI1O43347 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
MSI1O43347 MTND4P34-201ENST00000572715 1371 ntBASIC4.5□□□□□ -1.69
MSI1O43347 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 AC092162.3-201ENST00000624511 1624 ntBASIC4.5□□□□□ -1.69
MSI1O43347 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSI1O43347 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.49□□□□□ -1.69
MSI1O43347 AC093775.1-201ENST00000624154 1868 ntBASIC4.49□□□□□ -1.69
MSI1O43347 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSI1O43347 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
MSI1O43347 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSI1O43347 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSI1O43347 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSI1O43347 RNA5SP175-201ENST00000364275 119 ntBASIC4.49□□□□□ -1.69
MSI1O43347 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSI1O43347 AL078604.1-201ENST00000404609 466 ntBASIC4.49□□□□□ -1.69
MSI1O43347 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.49□□□□□ -1.69
MSI1O43347 RNA5SP36-201ENST00000410197 133 ntBASIC4.49□□□□□ -1.69
MSI1O43347 RN7SKP27-201ENST00000410684 333 ntBASIC4.49□□□□□ -1.69
MSI1O43347 FCF1P2-201ENST00000415284 583 ntBASIC4.49□□□□□ -1.69
MSI1O43347 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.49□□□□□ -1.69
MSI1O43347 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.49□□□□□ -1.69
MSI1O43347 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms