Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.58□□□□□ -1.84
LSM1O15116 AL163642.2-201ENST00000604722 1019 ntBASIC3.58□□□□□ -1.84
LSM1O15116 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LSM1O15116 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LSM1O15116 MIR6830-201ENST00000636015 70 ntBASIC3.58□□□□□ -1.84
LSM1O15116 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.58□□□□□ -1.84
LSM1O15116 AC104446.1-201ENST00000613728 1321 ntBASIC3.58□□□□□ -1.84
LSM1O15116 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSM1O15116 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LSM1O15116 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
LSM1O15116 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
LSM1O15116 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 SNORA56-201ENST00000383966 129 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AL807761.1-201ENST00000417622 171 ntBASIC3.57□□□□□ -1.84
LSM1O15116 HMGB3P20-201ENST00000417997 600 ntBASIC3.57□□□□□ -1.84
LSM1O15116 TCEA1P2-201ENST00000420496 906 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM1O15116 MORF4L1P7-201ENST00000426038 703 ntBASIC3.57□□□□□ -1.84
LSM1O15116 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM1O15116 NSRP1P1-201ENST00000444067 1693 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AC006326.1-201ENST00000445465 787 ntBASIC3.57□□□□□ -1.84
LSM1O15116 RPS29P31-201ENST00000446147 164 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AL513343.1-201ENST00000451818 792 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AC099563.1-201ENST00000456086 418 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM1O15116 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM1O15116 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM1O15116 AC092754.2-201ENST00000463506 460 ntBASIC3.57□□□□□ -1.84
LSM1O15116 NDUFA5P9-201ENST00000472609 340 ntBASIC3.57□□□□□ -1.84
LSM1O15116 NPM1P17-201ENST00000479221 602 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AC026979.1-201ENST00000492525 396 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM1O15116 AC108064.1-201ENST00000513791 460 ntBASIC3.57□□□□□ -1.84
LSM1O15116 MTND4P8-201ENST00000514997 1362 ntBASIC3.57□□□□□ -1.84
LSM1O15116 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM1O15116 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM1O15116 AC010306.1-201ENST00000523223 1117 ntBASIC3.57□□□□□ -1.84
LSM1O15116 C1DP5-201ENST00000525775 383 ntBASIC3.57□□□□□ -1.84
LSM1O15116 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM1O15116 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM1O15116 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.57□□□□□ -1.84
LSM1O15116 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM1O15116 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
LSM1O15116 AC005229.3-201ENST00000603438 323 ntBASIC3.57□□□□□ -1.84
LSM1O15116 AC016877.3-201ENST00000606778 504 ntBASIC3.57□□□□□ -1.84
LSM1O15116 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.57□□□□□ -1.84
LSM1O15116 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LSM1O15116 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LSM1O15116 PWAR6-201ENST00000552334 4618 ntBASIC3.56□□□□□ -1.84
LSM1O15116 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LSM1O15116 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 RNA5SP295-201ENST00000362655 121 ntBASIC3.56□□□□□ -1.84
LSM1O15116 RNU1-13P-201ENST00000384499 162 ntBASIC3.56□□□□□ -1.84
LSM1O15116 HMGB3P31-201ENST00000413333 595 ntBASIC3.56□□□□□ -1.84
LSM1O15116 OR8F1P-201ENST00000425243 930 ntBASIC3.56□□□□□ -1.84
LSM1O15116 RPL23AP69-201ENST00000431134 458 ntBASIC3.56□□□□□ -1.84
LSM1O15116 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 OR9M1P-201ENST00000459641 921 ntBASIC3.56□□□□□ -1.84
LSM1O15116 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 TPT1P3-201ENST00000492841 512 ntBASIC3.56□□□□□ -1.84
LSM1O15116 CEACAMP10-202ENST00000495431 496 ntBASIC3.56□□□□□ -1.84
LSM1O15116 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.56□□□□□ -1.84
LSM1O15116 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 OR7E13P-201ENST00000526052 910 ntBASIC3.56□□□□□ -1.84
LSM1O15116 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 OR5AP1P-201ENST00000529730 940 ntBASIC3.56□□□□□ -1.84
LSM1O15116 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
LSM1O15116 MIR4738-201ENST00000579134 87 ntBASIC3.56□□□□□ -1.84
LSM1O15116 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 AC135178.6-201ENST00000605314 398 ntBASIC3.56□□□□□ -1.84
LSM1O15116 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.56□□□□□ -1.84
LSM1O15116 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
LSM1O15116 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 SPRR2C-201ENST00000290702 219 ntBASIC3.55□□□□□ -1.84
LSM1O15116 OR4A15-201ENST00000314706 1035 ntBASIC3.55□□□□□ -1.84
LSM1O15116 MIR372-201ENST00000362225 67 ntBASIC3.55□□□□□ -1.84
LSM1O15116 SNORA62-201ENST00000365493 153 ntBASIC3.55□□□□□ -1.84
LSM1O15116 RNU6-805P-201ENST00000365643 106 ntBASIC3.55□□□□□ -1.84
LSM1O15116 SNORA3.3-201ENST00000408712 125 ntBASIC3.55□□□□□ -1.84
LSM1O15116 CR848007.2-201ENST00000424918 787 ntBASIC3.55□□□□□ -1.84
LSM1O15116 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.55□□□□□ -1.84
LSM1O15116 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
LSM1O15116 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.55□□□□□ -1.84
LSM1O15116 AL117339.2-201ENST00000430475 180 ntBASIC3.55□□□□□ -1.84
LSM1O15116 SETD6P1-201ENST00000444575 317 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms