Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC107068.1-201ENST00000563286 4218 ntBASIC4.56□□□□□ -1.68
PCDH17O14917 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDH17O14917 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDH17O14917 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDH17O14917 Z98755.1-201ENST00000407015 1384 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDH17O14917 GDI2P1-201ENST00000429312 1336 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AL672167.1-203ENST00000641299 2975 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH17O14917 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 RNU1-130P-201ENST00000363930 160 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RNA5SP88-201ENST00000365560 109 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 MIR708-201ENST00000390708 88 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 BTBD10P2-201ENST00000404779 676 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RNU6-920P-201ENST00000410926 92 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC129850.1-201ENST00000436203 508 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC016831.4-201ENST00000438302 307 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 SNRPEP7-201ENST00000438350 220 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC073587.1-201ENST00000447093 876 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH17O14917 AL162388.1-201ENST00000450912 352 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 AC104073.1-201ENST00000451988 151 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RPS27AP8-201ENST00000452665 445 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 AL445433.1-201ENST00000457507 257 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RPL23AP56-201ENST00000460778 453 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC090013.1-201ENST00000485147 480 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 FAM172BP-201ENST00000487497 1089 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 RPL23AP72-201ENST00000492447 435 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 DSTNP2-201ENST00000504533 515 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC112198.1-201ENST00000505369 1220 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 MTCYBP43-201ENST00000513621 740 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC016065.2-201ENST00000514530 444 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC008802.1-201ENST00000519121 791 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH17O14917 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDH17O14917 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 IMMP1LP1-201ENST00000605170 488 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC019193.2-201ENST00000610012 634 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 AC018816.2-201ENST00000621460 353 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 AC067931.1-201ENST00000624190 671 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 U6.101-201ENST00000637707 76 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 AC074029.4-201ENST00000624796 1859 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC130650.2-201ENST00000618736 2403 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDH17O14917 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDH17O14917 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDH17O14917 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDH17O14917 AC021755.1-201ENST00000559747 1447 ntBASIC4.55□□□□□ -1.68
PCDH17O14917 SCN1A-220ENST00000641603 12506 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH17O14917 A2MP1-204ENST00000566278 4130 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 AL133243.3-201ENST00000617415 3004 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PCDH17O14917 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PCDH17O14917 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDH17O14917 SNORA62-201ENST00000365493 153 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PCDH17O14917 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 EIF5P1-201ENST00000400019 1231 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDH17O14917 RPS3AP23-201ENST00000401762 784 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH17O14917 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH17O14917 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDH17O14917 Z99497.1-201ENST00000421282 135 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 COX6CP17-201ENST00000421389 185 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 AC004448.2-201ENST00000422360 586 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 BX119904.4-201ENST00000424402 301 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH17O14917 AL451139.1-201ENST00000434718 346 ntBASIC4.54□□□□□ -1.68
PCDH17O14917 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDH17O14917 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms