Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL669831.4-202ENST00000590817 238 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AL590229.1-201ENST00000603497 542 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC115286.1-201ENST00000604298 434 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 MIR6820-201ENST00000611508 62 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 AC009039.2-201ENST00000624524 529 ntBASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.4□□□□□ -1.54
COL4A3BPQ9Y5P4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 AC017104.4-201ENST00000636283 1592 ntBASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
COL4A3BPQ9Y5P4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-952P-201ENST00000391164 108 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 CYB5AP4-201ENST00000396692 399 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 SKINT1L-201ENST00000401057 817 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RNA5SP56-201ENST00000410277 118 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU2-15P-201ENST00000410692 191 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-920P-201ENST00000410926 92 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SKP100-201ENST00000411258 284 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 Z99497.1-201ENST00000421282 135 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL365338.1-201ENST00000422282 858 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 MUPP-201ENST00000438111 566 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 NPM1P33-201ENST00000438918 872 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL831737.1-201ENST00000441288 271 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 ARL4AP3-201ENST00000441452 574 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC005297.2-201ENST00000450430 606 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL162388.1-201ENST00000450912 352 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS29P22-201ENST00000472363 168 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SL558P-201ENST00000497468 299 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC112198.1-201ENST00000505369 1220 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 COX6CP8-201ENST00000522620 226 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AP001880.2-201ENST00000538233 448 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL049839.1-201ENST00000556151 657 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SL435P-201ENST00000584418 282 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC008782.1-201ENST00000603386 430 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC087283.1-201ENST00000604029 1074 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL121932.1-201ENST00000605542 214 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC090186.1-201ENST00000605991 572 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR7844-201ENST00000616161 122 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AL445264.1-201ENST00000621719 171 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC012414.7-202ENST00000622705 1090 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006927.3-201ENST00000638789 384 ntBASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.39□□□□□ -1.55
COL4A3BPQ9Y5P4 AP000542.2-201ENST00000623199 6179 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-1279P-201ENST00000383917 103 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-821P-201ENST00000390995 107 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC114755.2-201ENST00000413520 361 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL592293.2-201ENST00000422292 996 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS12P5-201ENST00000423449 371 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 ELOCP8-201ENST00000439309 332 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MTND5P14-201ENST00000441481 1267 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 ELOCP15-201ENST00000442090 332 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms