Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 SNORA70.10-201ENST00000384515 134 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 ZNF603P-201ENST00000405613 487 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AL356967.1-201ENST00000406305 431 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AL512430.2-201ENST00000406786 339 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPL21P108-201ENST00000413857 481 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC004448.2-201ENST00000422360 586 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPS27AP14-201ENST00000422868 454 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 TCEA1P1-201ENST00000449716 880 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 MTCYBP1-201ENST00000454315 1119 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPS17P2-201ENST00000461663 408 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RN7SL385P-201ENST00000468873 276 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPS15AP17-201ENST00000470598 390 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC010683.1-201ENST00000473673 378 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC005726.1-201ENST00000494679 427 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 ARL2BPP4-201ENST00000506854 471 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC093809.1-201ENST00000509155 340 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 OR4A45P-201ENST00000529954 901 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AL021997.1-201ENST00000605757 193 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 MIR6758-201ENST00000620653 63 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AC012414.7-202ENST00000622705 1090 ntBASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDHB1Q9Y5F3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AP000542.2-201ENST00000623199 6179 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 MTND4P16-201ENST00000466108 1367 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 SNORA51.6-201ENST00000384151 125 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 Y_RNA.517-201ENST00000384551 106 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 RNU6-146P-201ENST00000384602 108 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC025750.1-201ENST00000399891 379 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC119751.6-201ENST00000416712 186 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 RPL23AP74-201ENST00000437246 471 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 MTND1P1-201ENST00000445453 368 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 TPT1P12-201ENST00000448968 492 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AL356981.1-201ENST00000454879 684 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 SNRPFP4-201ENST00000456366 242 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC091564.1-201ENST00000464563 479 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 IGHV3-32-201ENST00000519182 355 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 HSPA8P13-201ENST00000523715 472 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 BGLT3-201ENST00000564523 994 ntBASIC4.94□□□□□ -1.62
PCDHB1Q9Y5F3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms