Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OR5M14P-201ENST00000506803 618 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 IGHV3-76-201ENST00000522465 295 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 OR4R3P-201ENST00000525084 838 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 NIFKP8-201ENST00000560500 874 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC090877.1-201ENST00000561418 344 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL009028.1-201ENST00000604895 802 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC090510.2-201ENST00000617465 629 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AL445528.2-201ENST00000620582 470 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KCNIP3Q9Y2W7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AP002001.2-201ENST00000529025 1469 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RNA5SP189-201ENST00000364920 115 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RNU6-441P-201ENST00000384545 106 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 MIR129-1-201ENST00000384972 72 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RPS3AP23-201ENST00000401762 784 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 SFR1P1-201ENST00000403720 688 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL391417.1-201ENST00000404100 426 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 SPTLC1P2-201ENST00000407089 121 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 UBE2V1P9-201ENST00000414760 368 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 EI24P1-201ENST00000416584 867 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RPEP3-201ENST00000425462 676 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 OR5BE1P-201ENST00000425977 939 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 COX6CP15-201ENST00000426313 211 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC096632.1-201ENST00000427395 310 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC114973.1-201ENST00000429057 632 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RPS27AP12-201ENST00000429552 465 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 NEK4P1-201ENST00000433383 879 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RANP8-201ENST00000444720 713 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 PPIAP20-201ENST00000449839 135 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 NF1P3-201ENST00000457709 450 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RPL21P11-201ENST00000461458 483 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC091959.2-201ENST00000477363 321 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RN7SL604P-201ENST00000492589 296 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 SNORA26.10-201ENST00000516427 141 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC008011.1-201ENST00000545989 227 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 MTND4LP25-201ENST00000570218 163 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL161729.3-201ENST00000603533 673 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL390816.3-201ENST00000604527 1066 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC009948.4-201ENST00000604692 675 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 HSPE1P14-201ENST00000605812 302 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL023583.1-201ENST00000607518 1143 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 RMST_8.1-201ENST00000610287 165 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 MIR6780A-201ENST00000615089 68 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 U73479.1-201ENST00000618062 168 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AL121594.5-201ENST00000631724 573 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 OR5BE1P-202ENST00000641168 1176 ntBASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KCNIP3Q9Y2W7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 AL355578.1-201ENST00000607405 1328 ntBASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KCNIP3Q9Y2W7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms