Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COPS3Q9UNS2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AP002001.2-201ENST00000529025 1469 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 MFSD8-236ENST00000641509 4050 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 RNU4-6P-201ENST00000410804 122 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 RPS15AP6-201ENST00000420703 385 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC241520.1-201ENST00000422654 1099 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 RPL18P10-201ENST00000425606 538 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AL096829.2-201ENST00000446582 742 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC098824.1-201ENST00000453565 980 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 PTGES3P3-201ENST00000511479 482 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC093755.1-201ENST00000512950 1023 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 NDUFA5P2-201ENST00000519723 344 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 OR4A12P-201ENST00000530847 918 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 MTND5P21-201ENST00000531961 522 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 MIR4789-201ENST00000577469 82 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 HMGN2P28-201ENST00000606102 262 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC112503.2-201ENST00000609005 552 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC121761.2-201ENST00000617300 689 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AL139089.1-201ENST00000620372 975 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 AC079684.1-201ENST00000621405 437 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.41□□□□□ -1.86
COPS3Q9UNS2 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COPS3Q9UNS2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
COPS3Q9UNS2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COPS3Q9UNS2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 SNORA51.12-201ENST00000384448 134 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RNU6-1151P-201ENST00000384684 107 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MIR199A2-201ENST00000385289 110 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 BTBD10P2-201ENST00000404779 676 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC092832.1-201ENST00000422934 400 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 FAR2P4-202ENST00000425399 584 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AL691449.1-201ENST00000426570 421 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RPL21P110-201ENST00000433345 446 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC010881.1-201ENST00000433830 235 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 CKS1BP5-201ENST00000434172 273 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC073143.1-201ENST00000436316 395 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 Z74696.2-201ENST00000436514 498 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 SKP1P1-201ENST00000438081 489 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 Z77249.1-201ENST00000444622 1175 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MOB1AP2-201ENST00000446060 614 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RPL21P18-201ENST00000469899 480 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 TMEM248P1-201ENST00000510579 951 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RAC1P2-201ENST00000511164 579 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 PHBP14-201ENST00000512887 367 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RN7SKP83-201ENST00000516512 178 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 SUMO2P20-201ENST00000520803 283 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 C1GALT1P3-201ENST00000522049 819 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC113192.3-201ENST00000529152 742 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MIR4504-201ENST00000577413 92 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 VN1R88P-201ENST00000596787 292 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AC133794.1-201ENST00000602731 914 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 AL365503.1-201ENST00000605247 905 ntBASIC3.4□□□□□ -1.87
COPS3Q9UNS2 MIR6748-201ENST00000610433 71 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms