Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC011492.1-201ENST00000600023 315 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC006254.3-201ENST00000603353 884 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 RNA5SP108-201ENST00000605921 117 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC039056.2-201ENST00000622261 511 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AL356863.1-201ENST00000623378 1080 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC015726.3-201ENST00000624501 418 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC012442.3-202ENST00000636742 206 ntBASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS29Q9UBQ0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 HSPA8P19-201ENST00000505359 1517 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC119744.1-201ENST00000454746 1715 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC025750.1-201ENST00000399891 379 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 RNA5SP498-201ENST00000411342 120 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC007390.1-201ENST00000415722 356 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ELOCP11-201ENST00000436690 332 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ISCA1P2-201ENST00000438679 421 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 CBX1P4-201ENST00000439415 457 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ELOCP16-201ENST00000444494 332 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 RPL31P20-201ENST00000449593 360 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 RN7SL542P-201ENST00000467147 294 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AP000893.1-201ENST00000474462 794 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC023141.12-201ENST00000512399 199 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 HIGD1AP18-201ENST00000520730 278 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ZNF192P1-203ENST00000565888 810 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 MIR8058-201ENST00000615737 89 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AL392088.2-201ENST00000637607 285 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AL353746.1-201ENST00000566293 6881 ntBASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS29Q9UBQ0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AP001148.1-201ENST00000624124 2359 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 RPS7P13-201ENST00000413955 498 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 RPS29P4-201ENST00000414733 161 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AL359073.1-201ENST00000448036 403 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 Z99127.3-201ENST00000448158 395 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 TPMTP4-201ENST00000450749 678 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 RPL37P6-202ENST00000464216 403 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC005476.1-201ENST00000554427 397 ntBASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS29Q9UBQ0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms