Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 NECAP1P2-201ENST00000455668 727 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC008565.1-201ENST00000509046 885 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC009948.4-201ENST00000604692 675 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC018555.1-201ENST00000567548 1980 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 NANOGP6-201ENST00000429190 847 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC011242.1-201ENST00000433596 1158 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
CHD7Q9P2D1 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHD7Q9P2D1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 MTND2P11-201ENST00000423638 648 ntBASIC3.09□□□□□ -1.92
CHD7Q9P2D1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC117522.3-201ENST00000507974 584 ntBASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CHD7Q9P2D1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AL138820.1-201ENST00000617901 5305 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC104297.1-201ENST00000393779 870 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 RPL7P12-201ENST00000446719 750 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 BNIP3P41-202ENST00000616656 861 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 RNA5SP289-201ENST00000362332 137 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 RAP1BP1-201ENST00000412709 553 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 RPL12P26-201ENST00000452430 487 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
CHD7Q9P2D1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CHD7Q9P2D1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 MIR184-201ENST00000384962 84 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AP001636.2-201ENST00000525517 696 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC005261.6-201ENST00000623072 1387 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 ATP5F1P6-201ENST00000402768 767 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 SNORA3.2-201ENST00000408221 125 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AL139415.2-201ENST00000431968 163 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC098826.3-201ENST00000603823 466 ntBASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHD7Q9P2D1 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 MIR764-201ENST00000390811 85 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 RPS4XP7-201ENST00000406274 780 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 RNA5SP68-201ENST00000363885 119 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 RANP4-201ENST00000413361 655 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHD7Q9P2D1 TCP11X3P-202ENST00000514289 1254 ntBASIC3.06□□□□□ -1.92
CHD7Q9P2D1 AC027287.1-201ENST00000553115 1453 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms