Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDLIM7Q9NR12 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 Y_RNA.97-201ENST00000363094 102 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 Y_RNA.402-201ENST00000383972 102 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RNU6-1009P-201ENST00000390996 107 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RNU6-780P-201ENST00000391030 104 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RPL12P9-201ENST00000412942 488 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL136133.1-201ENST00000413694 376 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC069157.1-201ENST00000421749 137 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL354766.1-201ENST00000423396 542 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC073464.1-201ENST00000429823 534 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RPL7P4-203ENST00000430239 730 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RPS4XP4-201ENST00000443195 763 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC002553.2-201ENST00000453217 340 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC091564.1-201ENST00000464563 479 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC015724.1-201ENST00000478577 156 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC013828.1-201ENST00000481845 158 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RPS27P23-201ENST00000487608 251 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 MTCYBP17-201ENST00000503579 789 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 SNORA18.6-201ENST00000516792 115 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 MTCO2P4-201ENST00000517968 247 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 NMNAT1P1-201ENST00000554095 876 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 CENPUP2-201ENST00000555897 1186 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC040958.1-201ENST00000561102 201 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC009101.1-201ENST00000568135 242 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 MIR5697-201ENST00000578045 78 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC090616.5-202ENST00000582111 297 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC090312.2-201ENST00000582687 378 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AP001506.1-201ENST00000615444 211 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL359880.1-201ENST00000621879 266 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL359697.1-201ENST00000624879 587 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 AL445437.1-201ENST00000623157 3087 ntBASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM7Q9NR12 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 MTCO1P14-201ENST00000441695 1559 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 ADAM24P-201ENST00000398655 2101 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 DBF4P1-201ENST00000412976 1892 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 OR4K15-201ENST00000305051 1216 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 Y_RNA.25-201ENST00000362528 102 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RNU6-462P-201ENST00000362659 105 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RNU6-1090P-201ENST00000364065 94 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RN7SKP186-201ENST00000365371 303 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 SNORA2.3-201ENST00000383920 135 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RNU6-1122P-201ENST00000384449 107 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RPS3AP36-201ENST00000398190 775 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 COX5BP7-201ENST00000414780 274 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 C1DP2-201ENST00000418167 426 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RPL37P21-201ENST00000435890 276 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC092013.1-201ENST00000438795 332 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RPS7P5-201ENST00000441482 581 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RN7SL443P-201ENST00000464331 290 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC019235.1-201ENST00000503847 207 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC093815.1-201ENST00000508637 280 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 AC097486.1-201ENST00000515331 210 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RN7SKP122-201ENST00000515923 296 ntBASIC5.63□□□□□ -1.51
PDLIM7Q9NR12 RNU6-358P-201ENST00000516564 75 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms