Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL445567.2-201ENST00000618935 498 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC007529.1-201ENST00000418574 2178 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 RNU1-32P-201ENST00000363937 159 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 OR6C69P-201ENST00000394268 893 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL603865.2-201ENST00000401679 213 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 LINC01347-201ENST00000417964 355 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 NUTF2P3-201ENST00000448540 384 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL096803.2-201ENST00000450032 677 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC093752.1-206ENST00000511823 336 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 LRRC34P1-201ENST00000542742 915 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL132857.1-201ENST00000555180 708 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC010735.1-201ENST00000567305 1026 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 MIR4284-201ENST00000578924 81 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC011477.5-201ENST00000586571 259 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL365400.2-201ENST00000605604 902 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC106052.1-201ENST00000608029 497 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC087683.2-201ENST00000611384 326 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AC079395.3-201ENST00000615161 484 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 AP004607.9-201ENST00000618202 316 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 MIR7153-201ENST00000637758 57 ntBASIC4.48□□□□□ -1.69
UPF2Q9HAU5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UPF2Q9HAU5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RNU5B-1-201ENST00000363286 116 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RNU6-146P-201ENST00000384602 108 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MTHFD2P2-201ENST00000407725 247 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RNA5SP239-201ENST00000410218 129 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AL592310.1-201ENST00000414330 671 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 USP9YP21-201ENST00000420603 432 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC010655.1-201ENST00000449336 292 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC098826.2-201ENST00000452011 651 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RPL21P71-201ENST00000465598 459 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RPL7L1P8-201ENST00000469911 741 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AP000926.1-201ENST00000479573 241 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MTCYBP35-201ENST00000503630 1137 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RNU2-27P-201ENST00000516185 142 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 SMARCE1P4-201ENST00000523647 241 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC120057.2-201ENST00000571520 271 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MIR4789-201ENST00000577469 82 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 MIR3138-201ENST00000585238 82 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 Z99289.3-201ENST00000605586 594 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC011472.4-201ENST00000615848 491 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC009159.2-201ENST00000617603 606 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC104985.3-201ENST00000623479 597 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AC068787.1-201ENST00000623908 691 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 AP000553.6-201ENST00000641242 118 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RLIMP1-201ENST00000339626 1680 ntBASIC4.47□□□□□ -1.69
UPF2Q9HAU5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UPF2Q9HAU5 RIOK3P1-201ENST00000418778 1528 ntBASIC4.46□□□□□ -1.69
UPF2Q9HAU5 AC114546.3-201ENST00000623582 1734 ntBASIC4.46□□□□□ -1.69
UPF2Q9HAU5 AL049555.1-201ENST00000562834 1933 ntBASIC4.46□□□□□ -1.69
UPF2Q9HAU5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UPF2Q9HAU5 AP002784.2-201ENST00000397300 549 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 Y_RNA.625-201ENST00000411256 107 ntBASIC4.46□□□□□ -1.7
UPF2Q9HAU5 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms