Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 HMGB3P20-201ENST00000417997 600 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 MTND2P16-201ENST00000419987 799 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC073310.1-201ENST00000423226 1033 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL591419.1-201ENST00000427423 339 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 RPL23AP62-201ENST00000463396 453 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC007688.1-201ENST00000475592 759 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AF279873.1-201ENST00000523393 313 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC008489.1-201ENST00000524271 483 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 OR7E13P-201ENST00000526052 910 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 EIF5A2P1-201ENST00000564027 460 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC087499.8-201ENST00000578406 226 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC012254.4-201ENST00000588843 273 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC239803.2-201ENST00000610161 430 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC020658.4-201ENST00000613987 684 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 U7.8-201ENST00000619968 63 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL109659.3-201ENST00000624985 950 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AC024560.2-201ENST00000507981 1497 ntBASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRRC40Q9H9A6 AL122126.1-201ENST00000546905 1318 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL592494.2-201ENST00000425455 1548 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 MIR30B-201ENST00000384850 88 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 NPM1P10-201ENST00000398310 865 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL391417.1-201ENST00000404100 426 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 ATF1P1-201ENST00000406040 927 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 MTND3P20-201ENST00000407663 186 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 SNORA11C-201ENST00000408532 129 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 MTCYBP24-201ENST00000420387 1106 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC004975.1-201ENST00000428733 208 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 FABP5P3-201ENST00000437960 408 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 TPRKBP1-201ENST00000456243 481 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AP000893.1-201ENST00000474462 794 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC133963.2-201ENST00000513686 578 ntBASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.76□□□□□ -1.81
LRRC40Q9H9A6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms