Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 FHP1-201ENST00000442741 703 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC016027.4-201ENST00000450866 277 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 SDC4P-201ENST00000453285 601 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 ST13P14-201ENST00000474095 734 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPL23AP11-201ENST00000475260 469 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPL39P5-202ENST00000512505 151 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC093853.1-201ENST00000515689 483 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RN7SKP288-201ENST00000516227 268 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-864P-201ENST00000516256 108 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNA5SP92-201ENST00000516437 110 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNA5SP503-201ENST00000517047 117 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AL163153.1-201ENST00000554223 283 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 CYP2C61P-201ENST00000604072 290 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC245517.5-201ENST00000611529 162 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-156P-201ENST00000621869 107 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 AC010325.3-201ENST00000641084 394 ntBASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BHLHE41Q9C0J9 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MTND5P28-201ENST00000438005 1594 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-522P-201ENST00000364497 107 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MIR548F5-201ENST00000408421 86 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RNU2-29P-201ENST00000410423 189 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RNA5SP345-201ENST00000410646 108 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RNU4-14P-201ENST00000410858 122 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RN7SKP247-201ENST00000411094 308 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RNU6-1304P-201ENST00000411374 106 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RPS3AP52-201ENST00000435639 297 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC007383.1-201ENST00000445875 636 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC002553.3-201ENST00000453002 341 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RPL12P30-201ENST00000488389 499 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC083795.1-201ENST00000491760 320 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC106872.2-201ENST00000494303 480 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC116562.3-201ENST00000506136 177 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 HMGN1P16-201ENST00000508308 283 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC068587.5-201ENST00000528506 175 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MT1CP-201ENST00000567054 174 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 COX6CP3-201ENST00000580869 223 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AL049794.2-201ENST00000616301 365 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 MIR6806-201ENST00000622141 64 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AL161756.3-201ENST00000641216 2071 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 AL592148.3-201ENST00000608771 2646 ntBASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
BHLHE41Q9C0J9 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 MTND4P14-201ENST00000435799 1354 ntBASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BHLHE41Q9C0J9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms