Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 HPVC1-201ENST00000629899 1198 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 AC017104.5-201ENST00000637647 639 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
CCSER1Q9C0I3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL512646.1-201ENST00000269395 1077 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 RNU6-356P-201ENST00000384140 107 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 SNORA70E-201ENST00000384492 135 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 MIR153-1-201ENST00000384914 90 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 HMGB3P18-201ENST00000406327 590 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC006989.1-201ENST00000427212 131 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL035246.1-201ENST00000433554 1255 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL133547.1-201ENST00000448546 220 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL035407.2-201ENST00000454090 378 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC089999.1-201ENST00000460336 374 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC068305.1-201ENST00000497406 726 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC010468.3-201ENST00000508225 458 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC104108.1-201ENST00000509930 412 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 RNU6-579P-201ENST00000516879 102 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC245389.1-201ENST00000605141 529 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC022079.2-201ENST00000619739 566 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 FAM157B-203ENST00000639350 358 ntBASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCSER1Q9C0I3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 ENSAP3-201ENST00000312710 333 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC007066.1-201ENST00000392902 381 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC018644.1-201ENST00000429934 551 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC146507.1-201ENST00000468335 354 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC087385.1-201ENST00000475062 312 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 UBE2CP3-201ENST00000502715 450 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 Vault.1-201ENST00000516474 102 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 RNA5SP309-201ENST00000516670 106 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC083923.1-201ENST00000523708 376 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AL442163.2-201ENST00000553912 710 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 MIR4644-201ENST00000579929 84 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 AL356863.1-201ENST00000623378 1080 ntBASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.09□□□□□ -1.75
CCSER1Q9C0I3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCSER1Q9C0I3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCSER1Q9C0I3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.08□□□□□ -1.76
CCSER1Q9C0I3 RNA5SP27-201ENST00000363839 119 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms