Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RPS24P13-201ENST00000442520 397 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 AC026790.2-201ENST00000606282 430 ntBASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD1Q96PZ7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CSMD1Q96PZ7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CSMD1Q96PZ7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD1Q96PZ7 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD1Q96PZ7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 HSPA8P1-201ENST00000425843 1833 ntBASIC2.59□□□□□ -2
CSMD1Q96PZ7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 RNA5SP68-201ENST00000363885 119 ntBASIC2.59□□□□□ -2
CSMD1Q96PZ7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 RNU6-482P-201ENST00000391068 107 ntBASIC2.59□□□□□ -2
CSMD1Q96PZ7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 AC096947.1-201ENST00000603233 470 ntBASIC2.59□□□□□ -2
CSMD1Q96PZ7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC2.59□□□□□ -2
CSMD1Q96PZ7 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 RPS12P18-201ENST00000442381 270 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 CKS1BP2-201ENST00000497342 240 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 AL392112.1-201ENST00000605115 829 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC010307.1-201ENST00000467206 836 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC099489.2-201ENST00000574976 260 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 KPNA2P2-201ENST00000419546 1489 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 Z95114.1-201ENST00000624264 14574 ntBASIC2.58□□□□□ -2
CSMD1Q96PZ7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CSMD1Q96PZ7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD1Q96PZ7 RNA5SP104-201ENST00000410989 118 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 RPL7L1P1-201ENST00000448259 785 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC006518.1-201ENST00000541449 943 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 ZNF658B-202ENST00000615961 3375 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 SNORD15B-201ENST00000384714 146 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL160275.2-201ENST00000412010 394 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL592148.1-201ENST00000413568 445 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 FTLP19-201ENST00000433300 394 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 RNU6-548P-201ENST00000517083 115 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 COX6CP8-201ENST00000522620 226 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC019072.1-201ENST00000604535 1551 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC063923.1-201ENST00000478982 1619 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 OR2AS1P-201ENST00000427827 319 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC021205.2-201ENST00000480069 347 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 RNA5SP458-201ENST00000516188 119 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AC017002.4-201ENST00000604721 1525 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.57□□□□□ -2
CSMD1Q96PZ7 NCAPGP1-201ENST00000505112 1814 ntBASIC2.57□□□□□ -2
CSMD1Q96PZ7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CSMD1Q96PZ7 AL356968.1-201ENST00000416622 474 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 MRPS31P2-201ENST00000451581 518 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC044913.1-201ENST00000557200 430 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms