Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 RN7SKP220-201ENST00000410611 288 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 OR2AS1P-201ENST00000427827 319 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 FTH1P1-201ENST00000437933 532 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AL671855.1-201ENST00000446875 1203 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 UQCRHP3-201ENST00000451503 251 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 RPL7P48-201ENST00000461513 746 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC017015.1-201ENST00000477387 286 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC068724.1-201ENST00000487100 792 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC093278.1-201ENST00000494700 600 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 RN7SKP272-201ENST00000516988 232 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 PSMA2P1-201ENST00000526365 646 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC007318.2-201ENST00000620999 243 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AP006248.2-201ENST00000623309 592 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC095050.2-201ENST00000510748 1458 ntBASIC2.52□□□□□ -2.01
GAFA1Q96PS6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AL035425.3-201ENST00000564206 4996 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 MIR148B-201ENST00000362252 99 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 MIR422A-201ENST00000362286 90 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 SNORA70E-201ENST00000384492 135 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 RNA5SP274-201ENST00000410484 108 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC127537.2-201ENST00000439258 465 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AL136097.1-201ENST00000456945 913 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AP001992.1-205ENST00000462248 379 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 RPS27P29-201ENST00000463110 252 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC117440.1-201ENST00000474107 571 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC092045.1-201ENST00000495716 1231 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC068305.1-201ENST00000497406 726 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 OR2A20P-203ENST00000498397 1268 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC009812.2-201ENST00000517657 457 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC068446.3-201ENST00000555285 382 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 VN1R79P-201ENST00000593540 513 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 BNIP3P11-201ENST00000603878 563 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC022960.2-201ENST00000616300 666 ntBASIC2.51□□□□□ -2.01
GAFA1Q96PS6 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
GAFA1Q96PS6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AL353692.2-201ENST00000407054 335 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AL024507.1-201ENST00000412741 274 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 RPS3AP12-201ENST00000443616 753 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 PRELID3BP6-201ENST00000503839 571 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AC026427.2-201ENST00000506228 536 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 RNA5SP341-201ENST00000516261 117 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 SNORA70.24-201ENST00000517233 118 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AP002404.1-201ENST00000532005 451 ntBASIC2.5□□□□□ -2.01
GAFA1Q96PS6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.5□□□□□ -2.01
GAFA1Q96PS6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms